Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele27g1099 | ATGGCTGCTATCACTTCAGTGGCTCTTCAGTACTCGTCCTCGTCGTCTTTACAATCCCATATGCATTCCTCGCCATTGGCACCTTCTTTAGAACCCACTCATGATCATAACTTGTGGGTGAGAGTGAGATCTCAGAAATCCACGAGGCAGAGATTGTGCCCTCAGAATAATCCCAAGGGGTTAACAATCCGAAGTGCGGCTACCAAACAAGCCAAATCACCAGCTGAAGAAGAGTGGAAGAAAAAGCGAGAAGTTCTTCTGCAGAAAAGAGTAAGAAGTGTGGATGCCAAGGAAGCTCTGCGCCTTCAGAAAGAAAATAACTTTGTGATTCTTGACGTTAGACCAGAAGCAGAGTTCAAAGAGGCCCATCCCCCAGGAGCTATCAATGTACAAATATACAGGCTTATAAAGGAGTGGACGGCTTGGGACATAGCCAGGCGAGCTGCATTTGCATTTTTTGGAATTTTCCAAGGGACTGAAGAGAACCCTGAGTTCTTACAGAGTGTGGAAGCACAATTAGATAAGAATGCCAAGATTATTGTAGCTTGCTCAACAGGGGGCACCATGAAACCATCCCAAAATCTACCCGAAGGTCAACAATCAAGATCATTGATAGCAGCCTACTTGCTAGTCCTCAACGGTTATACCAATGTCTTCCATCTAGAAGGTGGTCTTTACTCATGGTCGAAAGAGGAACTGCCACTGGTTTCAAAGGAGTGA | 720 | 0.4542 | MAAITSVALQYSSSSSLQSHMHSSPLAPSLEPTHDHNLWVRVRSQKSTRQRLCPQNNPKGLTIRSAATKQAKSPAEEEWKKKREVLLQKRVRSVDAKEALRLQKENNFVILDVRPEAEFKEAHPPGAINVQIYRLIKEWTAWDIARRAAFAFFGIFQGTEENPEFLQSVEAQLDKNAKIIVACSTGGTMKPSQNLPEGQQSRSLIAAYLLVLNGYTNVFHLEGGLYSWSKEELPLVSKE | 239 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele27g1099 | 239 | FunFam | Rhodanese-like domain-containing protein 14, chloroplastic | 78 | 236 | - | - | |
| Lele27g1099 | 239 | SUPERFAMILY | Rhodanese/Cell cycle control phosphatase | 89 | 236 | IPR036873 | - | |
| Lele27g1099 | 239 | SMART | rhod_4 | 94 | 234 | IPR001763 | - | |
| Lele27g1099 | 239 | Pfam | Rhodanese-like domain | 96 | 230 | IPR001763 | - | |
| Lele27g1099 | 239 | MobiDBLite | consensus disorder prediction | 44 | 69 | - | - | |
| Lele27g1099 | 239 | CDD | RHOD | 98 | 228 | - | - | |
| Lele27g1099 | 239 | PANTHER | RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 14, CHLOROPLASTIC-RELATED | 7 | 238 | IPR043186 | - | |
| Lele27g1099 | 239 | MobiDBLite | consensus disorder prediction | 44 | 78 | - | - | |
| Lele27g1099 | 239 | ProSiteProfiles | Rhodanese domain profile. | 104 | 237 | IPR001763 | - | |
| Lele27g1099 | 239 | Gene3D | - | 76 | 235 | IPR036873 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele27g1099 | Lele-ChrLele27 | 18338490 | 18340315 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele27g1099 | 1 | 239 | Sulfurtransferasese or Rhodanese | AT4G27700 | 64.435 | 6.39e-106 | 303 |