Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1096 ATGGCGGGTTCTGAGACCAAGCTCGTGCAGGAGTTGATTTTGTATGCAGCGAGCGCCGCATTGAGTTGCTTGGTCTTGTTTGTGGGTCTCCGGCAACTCGACCCGAATCGTGAGGCTTCAAAGAAGGCAATTGAGCACAAGAAGGAGATAGCCAAGCGTCTGGGCCGTCCTCTTATTCAGACAAACCCCTACGAGGATGTTATTGCTTGTGATGTTATAAATCCTGATGACATTGATGTGGAGTTTGATTCCATTGGAGGGCTGGAGAAGATCAAGCAAGCTTTATTTGAGCTTGTTATACTGCCTCTTAAACGACCAGAGCTGTTTTCTTATGGCAAGCTTCTTGGACCGCAGAAAGGGGTATTATTGTATGGTCCTCCTGGAACTGGGAAAACTATGCTTGCCAAAGCTATTGCGAAGGAATCTGGAGCTGTTTTTATTAATGTGAGGATATCAAACCTGATGAGCAAGTGGTTTGGTGATGCTCAAAAGCTTGTGGCAGCTGTATTTAGCCTGGCATATAAGCTCCAGCCTGCCATTATATTCATTGATGAAGTTGACAGTTTTCTTGGTCAGCGCCGTTCATCAGATCATGAGGCATTATTAAACATGAAAACTGAGTTTATGTCCTTGTGGGATGGATTTACCACAGAACAAAATGCTCGAGTGATGGTCCTTGCAGCAACCAATCGTCCTTCAGAACTTGATGAAGCCATACTTCGGCGTCTTCCTCAAGCCTTCGAAATTGGAGTTCCATATCAAAAAGAGAGGGTTGAGATATTAAAGGTTATCTTGAAGGGTGAGAGAATTGAAGACAACATTGACTTTGATTACATAGCTGGCTTGTGTGAGGGTTATACAGGTTCAGATTTATTTGAACTCTGCAAGAAATCTGCTTATTTCCCTCTTAGGGACCTACTAGATGAAGAGAAAAAAGGGAAACAGTCTCCTGCACCAAGGCCATTGTCACAGTCAGATTTTGAGAAGGTGCTTGCCACTTCAAGGAAAACGAAGGTTGCTGCAAGTGAATACAACAGATTAACCCTGCATACACCAACATGGTCGGGGCACAGGGAGTCAGATGTCCTTAGCCTAGCCCTGGGATCTTGGAGACATAGACGGTTTCAAATGATTGGAACACAGATGGCTAATAATGTATAA 1161 0.4419 MAGSETKLVQELILYAASAALSCLVLFVGLRQLDPNREASKKAIEHKKEIAKRLGRPLIQTNPYEDVIACDVINPDDIDVEFDSIGGLEKIKQALFELVILPLKRPELFSYGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVAAVFSLAYKLQPAIIFIDEVDSFLGQRRSSDHEALLNMKTEFMSLWDGFTTEQNARVMVLAATNRPSELDEAILRRLPQAFEIGVPYQKERVEILKVILKGERIEDNIDFDYIAGLCEGYTGSDLFELCKKSAYFPLRDLLDEEKKGKQSPAPRPLSQSDFEKVLATSRKTKVAASEYNRLTLHTPTWSGHRESDVLSLALGSWRHRRFQMIGTQMANNV 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1096 386 Gene3D - 79 337 IPR027417 -
Lele27g1096 386 ProSitePatterns AAA-protein family signature. 223 242 IPR003960 GO:0005524|GO:0016887
Lele27g1096 386 Pfam ATPase family associated with various cellular activities (AAA) 121 250 IPR003959 GO:0005524|GO:0016887
Lele27g1096 386 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 28 344 - -
Lele27g1096 386 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 80 331 IPR027417 -
Lele27g1096 386 Pfam AAA+ lid domain 273 309 IPR041569 -
Lele27g1096 386 Gene3D - 252 334 - -
Lele27g1096 386 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Lele27g1096 386 CDD AAA 86 250 - -
Lele27g1096 386 FunFam ATPase family AAA domain-containing protein 1 79 256 - -
Lele27g1096 386 SMART AAA_5 117 257 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1096 Lele-ChrLele27 18326329 18331300 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1096 38 317 Calmodulin-binding Proteins AT3G56690 32.746 2.22e-39 147