Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1083 ATGGAGGTTGATGAAGAGTATATTCAAGCATCAGAAGAAAGCTTCATCAGCTGCTCAGAGCCGCCACCTCAGAATTCAAGGAAGAAGAACAAAGTAGTGAACAAGAGGAGGTTTAGTGATGAACAAATCAGATCATTGGAGTGCATATTTGAGTCAGAGTCCAAGTTAGAGCCAAGGAAGAAGATCCAAGTAGCAAGAGATCTTGGTCTACAACCTCGCCAAGTCGCTATATGGTTCCAGAACAGAAGAGCCAGGGGGAAATCCAAATGGATAGAGCAAGAATACAGGAAGCTCAGAGATGATTATGAGAATTTAGTTTCCAGGTTTGAGTCCCTCAAGAAAGAGAAGGAGTCCTTGCAAGTAGAGTTGCAGAATCTGCATGATCTAATGGAGACATCTCACAATGGTGAAGAGAAAACGAGCACAGATAAGCCAAGTTCCTCTTATGAGGGTTTACATGTCAGAGAAGAAGGCATGCATTTACGAGATCAAAGTGAAATGAGCAAGAAGAATAATAATGGGTATTCTGAAGATAATACAGAACACCAACTTCTGAGAATGGAGGAGCTTGAAAAATGGTACGGTGGAGATCCAAGTGGCCTCTTAGATCAACCTTGTAGTTCACATTGGTTGGATTTCTGGACTTGA 648 0.4198 MEVDEEYIQASEESFISCSEPPPQNSRKKNKVVNKRRFSDEQIRSLECIFESESKLEPRKKIQVARDLGLQPRQVAIWFQNRRARGKSKWIEQEYRKLRDDYENLVSRFESLKKEKESLQVELQNLHDLMETSHNGEEKTSTDKPSSSYEGLHVREEGMHLRDQSEMSKKNNNGYSEDNTEHQLLRMEELEKWYGGDPSGLLDQPCSSHWLDFWT 215
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1083 215 FunFam Homeobox-leucine zipper protein ATHB-7 12 89 - -
Lele27g1083 215 MobiDBLite consensus disorder prediction 12 33 - -
Lele27g1083 215 Pfam Homeobox associated leucine zipper 90 130 IPR003106 GO:0006355|GO:0043565
Lele27g1083 215 MobiDBLite consensus disorder prediction 159 179 - -
Lele27g1083 215 SMART HOX_1 27 93 IPR001356 GO:0003677
Lele27g1083 215 MobiDBLite consensus disorder prediction 12 28 - -
Lele27g1083 215 Pfam Homeodomain 35 87 IPR001356 GO:0003677
Lele27g1083 215 MobiDBLite consensus disorder prediction 131 150 - -
Lele27g1083 215 PRINTS Lambda-repressor HTH signature 69 85 IPR000047 GO:0003677
Lele27g1083 215 PRINTS Lambda-repressor HTH signature 60 69 IPR000047 GO:0003677
Lele27g1083 215 SUPERFAMILY Homeodomain-like 17 88 IPR009057 -
Lele27g1083 215 Coils Coil 95 129 - -
Lele27g1083 215 ProSitePatterns 'Homeobox' domain signature. 64 87 IPR017970 GO:0000981|GO:0006355
Lele27g1083 215 CDD homeodomain 35 90 IPR001356 GO:0003677
Lele27g1083 215 ProSiteProfiles 'Homeobox' domain profile. 29 89 IPR001356 GO:0003677
Lele27g1083 215 Gene3D - 16 93 - -
Lele27g1083 215 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 27 178 IPR045224 GO:0003700
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele27g1083 Lele-ChrLele27 18254033 18254791 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1083 11 215 Homeobox Transcription Factor Family AT2G46680 38.956 5.47e-39 133
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lele27g1083 Homeodomain 7.8e-16 CL0123