Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1052 ATGCCAGCGACGCGCTCAAGGAAGCAGTGGTTCGAAATGGGGTGGAAGAGGATAGAGAAGGCAAAGATCGATGTTTGCAAATGGGAGCCCTGGGATTTGCCTGATTTATCGGTGATACGGAACAAGGATCCAGAGTGGTTCTTCTTCTGTCCACAGGACCGCAAGTATCCGAATGGCCATAGATTGAACCGAGCAACAACTCATGGGTATTGGAAGGCGACTGGCAAGGATCGAAGAATTAAGTCTGGTTCCAACTTGATAGGAATGAAGAAAACTTTAGTCTTCTACAGTGGTCGTGCTCCCAGGGGGAAGAGGACCCATTGGGTTATGCATGAGTACCGTCCCACTCTTAAGGAGCTTGATGGTACCAATCCTGGACAGAATGCCTATGTCCTCTGTCGTTTGTTTAAGAAACAAGATGAGAGTGTTGAAGTTGATGAAGCAGAACGGACTGCGTCAACTCCCACTGCTGCTGTTATTAACTCTCCAGAAGAAATACAGTCTGATGCAGTTATGACTGTGGTATCCCCGTCGCCAGCTTCGGAGGATGATAAGCCGAAGATAGCTCCAGTCTGTATTTCAGAGAACACTGAAGAAACCGCATCTAACGTAATAACATCAGCTGATTGCCATAGTGATGGGGGTGATGCTTATGACGCACAAAATCAAAATGTAGATAAAACAGCTTTCGAGGTGGATCCACTGTTGAACCTTGATGATATATTAAATGAACCAATAACTGGGCCATTTGATGATAAGATGTTCTCCCCATTACGTGTGCATATGCCGTCAGAATTTTATGATCCGGTGTGCAATGAATCAGATGGTCAATGTCTGCTGCAACTTCCATATGGTACAAATGAAACAAATATTTCAGACTTCTTCGACTCATACATTAATTGTGGTGAGTTGTCCTATGATGACTACATCAGTCAAAAGCCAGCCTCTGGCAATTTAAATCCTTGGGACAATGGATCTGATAATGTCTCAGATGTGAACATGGCCAATATGCTGCATTGGCAAGCATTGCATGCTGGGCATCCTGAGGAGAAAATTGACAATAGGGTTCCTGCCATGATAGATACGGCTTCAGAATTTAACAGAACCATTACCTCTGACCTCAGTGGTTATAATATGGGGATGTTCCAAAGCCATCCTCAGATGGCTTTGCCATCTGATGTTGCTCTTGGCCCGGTCTATGGCGTATTAAATGGTTTTCAAGAACCAAGAAACTACAATACGGTTGTTGGCGGTGATAATGGTACTGGGATCAAGATTAGGACTCGCCAAGTGCGAAATGAACAGGTAAACACGAACCCTATGAACCAAGGACCAGGTACTGCTCCAAGAAGAATACGTCTACAAGTATCTCCAACTCGCTTCAGTAAAGTTGAGAAAGATGGGAGATGTGCGCAAGAAAACCATGATTCAAAACCAATCATCAAAAGGGAGACTAAAGCCTCAGAAAATGCTACTGCTGCTGAAGAGGATGCTACTAATACCGAGACTGGGAGTGAACCTTTGACTCCCGAGTCAGTTGACAGTAACAAGATTTCTCAGCTACTTGTTACAAATGAAGATACTCTCTCAAGTTTAAAAGAGACGTTTTTGTGCAAATCAGTTCAGTGCGCTTCATCTCGTGCCACAATGTGGTCATCTACATTGGTATTCTGTGTTAGTTTAATGGCCACAGTGGTATTCGTAGCTAACATATGGGGAATTATTAAATTTTGA 1734 0.4371 MPATRSRKQWFEMGWKRIEKAKIDVCKWEPWDLPDLSVIRNKDPEWFFFCPQDRKYPNGHRLNRATTHGYWKATGKDRRIKSGSNLIGMKKTLVFYSGRAPRGKRTHWVMHEYRPTLKELDGTNPGQNAYVLCRLFKKQDESVEVDEAERTASTPTAAVINSPEEIQSDAVMTVVSPSPASEDDKPKIAPVCISENTEETASNVITSADCHSDGGDAYDAQNQNVDKTAFEVDPLLNLDDILNEPITGPFDDKMFSPLRVHMPSEFYDPVCNESDGQCLLQLPYGTNETNISDFFDSYINCGELSYDDYISQKPASGNLNPWDNGSDNVSDVNMANMLHWQALHAGHPEEKIDNRVPAMIDTASEFNRTITSDLSGYNMGMFQSHPQMALPSDVALGPVYGVLNGFQEPRNYNTVVGGDNGTGIKIRTRQVRNEQVNTNPMNQGPGTAPRRIRLQVSPTRFSKVEKDGRCAQENHDSKPIIKRETKASENATAAEEDATNTETGSEPLTPESVDSNKISQLLVTNEDTLSSLKETFLCKSVQCASSRATMWSSTLVFCVSLMATVVFVANIWGIIKF 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1052 577 MobiDBLite consensus disorder prediction 431 516 - -
Lele27g1052 577 MobiDBLite consensus disorder prediction 492 516 - -
Lele27g1052 577 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 16 195 - -
Lele27g1052 577 Pfam No apical meristem (NAM) protein 22 114 IPR003441 GO:0003677|GO:0006355
Lele27g1052 577 MobiDBLite consensus disorder prediction 431 445 - -
Lele27g1052 577 Gene3D NAC domain 9 143 IPR036093 GO:0003677|GO:0006355
Lele27g1052 577 SUPERFAMILY NAC domain 22 138 IPR036093 GO:0003677|GO:0006355
Lele27g1052 577 MobiDBLite consensus disorder prediction 460 491 - -
Lele27g1052 577 ProSiteProfiles NAC domain profile. 1 138 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1052 Lele-ChrLele27 18056395 18060345 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1052 23 456 NAC Transcription Factor Family AT4G35580 40.315 9.65e-76 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele27g1052 NAM 2.5e-21 No_clan