Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1041 ATGAAGATGGAGATGAGGTCGTCGAGGAAGGTGGAGAAGGTTAAAAATGGTGTTTTACCCAAAGAATTAGTATTTACAAGCACTAAATATCACATAAGTAGAAAGCAAGTCTCTGCAAATCCCGAAGCTGACATTTTTGAGCTCTTTCTTTCGCCTCCCTCCCCATCGATCCAGGTCGAAGCAAGAGGTTACATAAACATGGATGCAACCGTTGCTTTATCGCTCATAGAAGGTTTCTTAATCTTATTGGCTATAGCAACTAATAAAGCTCTCAGATTTCTCTCTTCTTCACTTCATGTTGTTCATCAGATCAGTTGTAAAAGCGAAGATGCTTCAATTCCGACAGTTTCTTCTTCTGATCATATTGTTGTTGGTGATCCTCCTCCAGCAACTAAGTATGAGGTGTTCCTTAGTTTTAGAGGAGAAGACACTCGCAACAATTTCGCTAGTTATCTTTATGAAGCACTTTGTAAAGCAAATATTCAAACTTTTATGGATCACAAACTCCACAAAGGAGATGATATCTCACCAATTCTTCTAAGAACCATAGAGGAATCAGAGATTTCTGTGATTATTTTCTCTCAGGATTACGCTTCTTCAACTTGGTGTTTGGATGAGCTTGTTCACATATTAGAATGCAAGAAAAAATTTGGAAGGGTTGTGGTACCTATTTTCTACAAAATTGACCCATCAAATGTGAGCAAACAAAGTGGGAGCTTTGGAGATGGATTTGCTAAACTGAAGCAGAGATTTAAAGACAACCCAAAAAAATTACACAAGTGGGAAAATGCTTTGATCCAGTCAACAAGCCTCTCTTCTGGATGGGATTCCAAGAATATCAGGCCTGAGTCCAAACTCATTAAAGAAATTGTCAAAGATATCTTGAGCAAACTGAACTACTGTACATCATCATCATCAGGTCATGTGGAAGGACTTGTGGGCATTAATCATAAAATTGAGAAAATTGAAGAACTTTTGATGGATGCTCGGATTGTAGGAATATGGGGCATAGGTGGTATAGGTAAAACTACACTTGCCAAAGCTGTGTTTCACAAATTGAAATCACAATTTGAAGCCTCCTCATTTGTCGGAAATGTAAGAGAACAACTTGCAAGAACTACAGTTGAAAATATACAAGAAAAATGCCTTAAAGAATTATTAAAAGATGAGGGCCTTCACATCTACAACATGAGATCCACTTTTGTAAAACGTAGGCTTCAACGCAAGAAAATCCTTCTGATACTTGATGACGTGGACAATTTATTAGCAGCTGAAGATTTAACCAAGTTGTGTGATTGGTTTGGAGAAGGAAGCAGAATTATTGTTACCTCAAGAGACATGCAAGTTCTTAAGAATGCTTCTGCAACTACCACATATCATGTTAAGGAATTAGAGTTCCGTGATGCTCTAAATCTCTTCAGTTTGAAAGCGTTTAAGCAAAATGAGCCATTTAAAAACTATTTGGAGTTATCAAAGTGGGTTAGAGATCCCTCATCTCAGTGA 1503 0.3759 MKMEMRSSRKVEKVKNGVLPKELVFTSTKYHISRKQVSANPEADIFELFLSPPSPSIQVEARGYINMDATVALSLIEGFLILLAIATNKALRFLSSSLHVVHQISCKSEDASIPTVSSSDHIVVGDPPPATKYEVFLSFRGEDTRNNFASYLYEALCKANIQTFMDHKLHKGDDISPILLRTIEESEISVIIFSQDYASSTWCLDELVHILECKKKFGRVVVPIFYKIDPSNVSKQSGSFGDGFAKLKQRFKDNPKKLHKWENALIQSTSLSSGWDSKNIRPESKLIKEIVKDILSKLNYCTSSSSGHVEGLVGINHKIEKIEELLMDARIVGIWGIGGIGKTTLAKAVFHKLKSQFEASSFVGNVREQLARTTVENIQEKCLKELLKDEGLHIYNMRSTFVKRRLQRKKILLILDDVDNLLAAEDLTKLCDWFGEGSRIIVTSRDMQVLKNASATTTYHVKELEFRDALNLFSLKAFKQNEPFKNYLELSKWVRDPSSQ 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1041 500 PRINTS Disease resistance protein signature 405 419 - -
Lele27g1041 500 PRINTS Disease resistance protein signature 331 346 - -
Lele27g1041 500 FunFam Disease resistance protein (TIR-NBS-LRR class) 129 300 - -
Lele27g1041 500 Pfam NB-ARC domain 317 482 IPR002182 GO:0043531
Lele27g1041 500 Pfam TIR domain 132 305 IPR000157 GO:0007165
Lele27g1041 500 Gene3D - 302 460 IPR027417 -
Lele27g1041 500 ProSiteProfiles TIR domain profile. 131 298 IPR000157 GO:0007165
Lele27g1041 500 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 133 492 IPR044974 GO:0006952
Lele27g1041 500 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 308 494 IPR027417 -
Lele27g1041 500 Gene3D - 129 301 IPR035897 -
Lele27g1041 500 SMART till_3 132 271 IPR000157 GO:0007165
Lele27g1041 500 SUPERFAMILY Toll/Interleukin receptor TIR domain 130 267 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1041 Lele-ChrLele27 17996440 18001252 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1041 122 473 WRKY Transcription Factor Family AT4G12020 30.685 2.11e-39 151