Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1040 ATGTCTCTGCAAATCGACAATTTTGAGCTCTTTCTTTCGCTTCCCTCCACATCGATCCAGGTCGAAGCAAGAGGTTACATAAACATGGATGCAACCGTTGCTTTATCGCTCATAGAAGGTTTCTTAATCTTATTGGCTATAGCAACTAATAAAGCTCTCAGATTTCTCTCTTCTTCACTTCATGTTGTTCATCAGATCAGTTGTAAAAGCGAAGATGCTTCAATTCCGACAGTTTCTTCTTCTGATCATATTGTTGTTGGTGATCCTCCTCCAGCAACTAATGGGAGCTTTGGAGATGGATTTGCTAAACTGAAGCAGAGATTTAAAGACAACCCAAAAAAATTACACAAGTGGGAAAATGCTTTGATCCAGTCAACAAGCCTCTCTTCTGGATGGGATTCCAAGAATATCAGGCCTGAGTCCAAACTCATTAAAGAAATTGTCAAAGATATCTTGAGCAAACTGAACTACTGTACATCATCATCATCAGGTCATGTGGAAGGACTTGTGGGCATTAATCATAAAATTGAGAAAATTGAAGAACTTTTGATGGATGCTCGGATTGTAGGAATATGGGGCATAGGTGGTATAGGTAAAACTACACTTGCCAAAGCTGTGTTTCACAAATTGAAATCACAATTTGAAGCCTCCTCATTTGTCGGAAATGTAAGAGAACAACTTGCAAGAACTACAGTTGAAAATATACAAGAAAAATGCCTTAAAGAATTATTAAAAGATGAGGGCCTTCACATCTACAACATGAGATCCACTTTTGTAAAACGTAGGCTTCAACGCAAGAAAATCCTTCTGATACTTGATGACGTGGACAATTTATTAGCAGCTGAAGATTTAACCAAGTTGTGTGATTGGTTTGGAGAAGGAAGCAGAATTATTGTTACCTCAAGAGACATGCAAGTTCTTAAGAATGCTTCTGCAACTACCACATATCATGTTAAGGAATTAGAGTTCCGTGATGCTCTAAATCTCTTCAGTTTGAAAGCGTTTAAGCAAAATGAGCCATTTAAAAACTATTTGGAGTTATCAAAGTGGGTTGCACCAGGATATTTATCATTTTTTCAACAATGTCAAGGCGAGGATTGA 1101 0.3769 MSLQIDNFELFLSLPSTSIQVEARGYINMDATVALSLIEGFLILLAIATNKALRFLSSSLHVVHQISCKSEDASIPTVSSSDHIVVGDPPPATNGSFGDGFAKLKQRFKDNPKKLHKWENALIQSTSLSSGWDSKNIRPESKLIKEIVKDILSKLNYCTSSSSGHVEGLVGINHKIEKIEELLMDARIVGIWGIGGIGKTTLAKAVFHKLKSQFEASSFVGNVREQLARTTVENIQEKCLKELLKDEGLHIYNMRSTFVKRRLQRKKILLILDDVDNLLAAEDLTKLCDWFGEGSRIIVTSRDMQVLKNASATTTYHVKELEFRDALNLFSLKAFKQNEPFKNYLELSKWVAPGYLSFFQQCQGED 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1040 366 PRINTS Disease resistance protein signature 262 276 - -
Lele27g1040 366 PRINTS Disease resistance protein signature 188 203 - -
Lele27g1040 366 Gene3D - 153 317 IPR027417 -
Lele27g1040 366 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 66 349 IPR044974 GO:0006952
Lele27g1040 366 Pfam NB-ARC domain 174 340 IPR002182 GO:0043531
Lele27g1040 366 Gene3D - 64 152 IPR035897 -
Lele27g1040 366 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 164 351 IPR027417 -
Lele27g1040 366 Pfam TIR domain 93 162 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1040 Lele-ChrLele27 17980073 17984936 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1040 102 330 WRKY Transcription Factor Family AT4G12020 34.177 7.89e-31 122