Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1037 ATGGAACGGACCAGATTGCTGAGGGCGGTGGATAGAGAAGATGGCTTTGATAAGGAAGATGATCAGATGATGAAGAGTAGGAGAGAAGTGAAAGTGTTGTCGTTCTTTGAACTGTTGAGCTATGCTGATACAGTGGACTGGCTTCTCATGGCGTTGGGGGCTCTGGGTTCTGTAGTTCACGGCACGGCTTTCCCTGTTGGCTATCTCCTGCTCGGAATAGCTCTTAATACTTTTGGCAGCAATATCAATGACAGTGACGCCATGGCTAGAGCCCTTAAAGAAAAGGTTGTTCCCTATGTGTGGTACATGGCCATCGCCACATTTCCTGCTGGGATACTTGAGACGGGGTGTTGGATGTATACAAGTGAAAGACAAGTAGCAAGGCTAAGATTAGCATACCTACGAGCAGTACTAAGCCAAGAGATCGGAGCATTTGACACTGAATTAACAAGTGGCAAAATCATCAATGGAATCAGCAACCACATGAGTATCATACAAGATGCTATTGGCGAGAAGTTGGGTCACTTCACCTCATGCTTTGCAACTTTGTTCTCTGGACTTGTGATTGCTGCATATTGCACCTGGGAAATTGCACTTCTGTGTTTAGTGGTTGTTCCCCTTACTCTTCTTATAGGGGCCACTTACACCAAGAGAATGAACAACATGTTAACCACCAAAATGATTTACCAGTCTGAAGTCACAGCTATGATTGAACAGGCACTTATAAAAGGAGTTGGAACAGGAATGTTCCAAACTGTAAGTTTTGTTTCATGGGCTCTCATTGTATGGGTTGGAGCTGTTGTGGTCACTGCTCATAGAGCTTCTGGAGGAGACATTATTACTGCAGTCATGAGCATTCTCTTTGGTGCCATATATTTGACTTATGCTGCAACAGACATGCAAATATTCAATCAGGCCAAAGCAGCAGGATATGAGTTCCTGAGAAGAAACATAGGAGCTGTTTCCCAAGAACCTTCACTTTTCACAGGAACCATCAAGGATAATTTGAAAGTGGGAAAGATGGATGCAAATGATCAAGAGATACAGAGAGCAGCAGAAATGTCAAATGCACACTCTTTCATATCACAACTTCCAGATCAGTACCTAACAGAGAACCTTGAACCACTTCCTGAATCAAGCTTTGCAAAGACAGCCATTGGCGCCTTTGCAGCAGCTTTTTCTGGCATCTCAAAGCCAGTTTTTGGATTCTACATTATCACCATTGGAGTAGCATACTTTGGTCACGATGCAAAACGCAAAGTCGCATTGTATTCTATCATCTTCGCTGCAATAGGGTTACTTTCATTATTCAGTCACACCTTGCAACATTACTTCTTTGGAATTATTGGAGAAAAGGCCATGGGAAATCTCAGACGAGCTCTTTATTCAGGAGTGCTTCGTAACGAAGTTGGCTGGTTTGACAAACCTGAGAACAGTGTTGGTTCACCAACTTCACGCATTATAAGTGTCACAACATTGGTCAAAGTCATAATTGCTGATCGAATGTCTGTAATTGTCCAATGCATTTCCTCAGTACTGATAGCAACAGTGGTGAGCATGGTTGTTAACTGGAGAATGGGCTTAGTAGCTTGGGCAGTTATGCCGTGTCACTTCATTGGTGGTCTGGTTCAAGCCAAATCTGCTAAAGGATTCTCGGGAGACAACTCTGCTGCACATTCTGAACTTGTTGCTCTTACATCGGAGTCCACGACCAACATTAGGACTGTCGCATCATTTTGCCATGAAGAACATGTTTTGAGGAAAGCCAAAGCATCCTTAGACATCCCGAAGAAGAAATACAGAATTGAAAGCATCAAATATGGAATCATTCAGGGATTCTCTATTTTCTTATGGAACGTTGCTCATGCTGTAGCTTTATGGTACACTGCAATTCTCGTCGAAAGAAGACAAGCTTCATTCGAAAATGGTAGGGGTGTTCATAGTGCCCGGTGGCCCGGTCCGCCCGCCCGAGCCCGTTATATAAGTGCAATGAAGGCAATAAGTCAAAAGGGAGGGAGTGGAATGCATTCAAGAACTACTCAGATCACAATAGCTCATAGGCTTTCCACTGTAATAAACTCAGATATCATAATTGTCATGGAGAAAGGCAAAATCGTGGAGATGTGGTCCCACTCAACCTTGATAGAATCAGAAACAGGACTTTACTCAAGGCTATTCAGGCTGCAGAACTTTGAAGAAAGCTGA 2205 0.434 MERTRLLRAVDREDGFDKEDDQMMKSRREVKVLSFFELLSYADTVDWLLMALGALGSVVHGTAFPVGYLLLGIALNTFGSNINDSDAMARALKEKVVPYVWYMAIATFPAGILETGCWMYTSERQVARLRLAYLRAVLSQEIGAFDTELTSGKIINGISNHMSIIQDAIGEKLGHFTSCFATLFSGLVIAAYCTWEIALLCLVVVPLTLLIGATYTKRMNNMLTTKMIYQSEVTAMIEQALIKGVGTGMFQTVSFVSWALIVWVGAVVVTAHRASGGDIITAVMSILFGAIYLTYAATDMQIFNQAKAAGYEFLRRNIGAVSQEPSLFTGTIKDNLKVGKMDANDQEIQRAAEMSNAHSFISQLPDQYLTENLEPLPESSFAKTAIGAFAAAFSGISKPVFGFYIITIGVAYFGHDAKRKVALYSIIFAAIGLLSLFSHTLQHYFFGIIGEKAMGNLRRALYSGVLRNEVGWFDKPENSVGSPTSRIISVTTLVKVIIADRMSVIVQCISSVLIATVVSMVVNWRMGLVAWAVMPCHFIGGLVQAKSAKGFSGDNSAAHSELVALTSESTTNIRTVASFCHEEHVLRKAKASLDIPKKKYRIESIKYGIIQGFSIFLWNVAHAVALWYTAILVERRQASFENGRGVHSARWPGPPARARYISAMKAISQKGGSGMHSRTTQITIAHRLSTVINSDIIIVMEKGKIVEMWSHSTLIESETGLYSRLFRLQNFEES 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1037 734 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 385 633 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele27g1037 734 SUPERFAMILY ABC transporter transmembrane region 38 309 IPR036640 GO:0005524|GO:0016020
Lele27g1037 734 CDD ABC_6TM_Pgp_ABCB1_D2_like 385 642 - -
Lele27g1037 734 CDD ABC_6TM_Pgp_ABCB1_D1_like 50 312 - -
Lele27g1037 734 Gene3D ABC transporter type 1, transmembrane domain 29 242 IPR036640 GO:0005524|GO:0016020
Lele27g1037 734 Gene3D ABC transporter type 1, transmembrane domain 381 647 IPR036640 GO:0005524|GO:0016020
Lele27g1037 734 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 308 370 IPR027417 -
Lele27g1037 734 PANTHER ABC TRANSPORTER B FAMILY 312 370 - -
Lele27g1037 734 Gene3D - 312 370 IPR027417 -
Lele27g1037 734 SUPERFAMILY ABC transporter transmembrane region 385 640 IPR036640 GO:0005524|GO:0016020
Lele27g1037 734 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 674 729 IPR027417 -
Lele27g1037 734 Gene3D - 675 733 IPR027417 -
Lele27g1037 734 Pfam ABC transporter transmembrane region 51 241 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele27g1037 734 Pfam ABC transporter transmembrane region 386 642 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele27g1037 734 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 51 245 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1037 Lele-ChrLele27 17939866 17947744 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1037 677 731 Calmodulin-binding Proteins AT2G36910 44.643 1.28e-07 53.5