Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1029 ATGGAACGAATTCCCATGTGGGTAGTCCTGTTTTCATGCATTTTCTTCATTAACGTAACGCATTGTGTGGAGGATGAGGTCAAGAGCTCAATGATAAGCTTCCTTGCAAAACTCTCTGGCCAACAGAGCTTTTCTTCTTTGAATTGGAAGGCAGATTCTGATCCTTGTAAGGATCTCTGGCATGGCGTAGCCTGTGATTCTCGTAATGTATCAGTGAGAAGGCTGTTTCTTGACTGGTTGAATTTATCTGGAACTCTTGATGCTGCTATTCTCTGCAATAGTCAACCTCTAGCTGATTCTTTGATGATTCTGAATCTTGATGGAAACAACGTTAATGGAGGAATATCAGATGAGATTGGAAACTGCAAACAGCTAACTCGTTTGTACGTAGGGGGAAATCAACTTTCTGGGGAAATTCCTCCTTCACTTGCCATGTTAAATAATCTGAAAAGGCTTGATATTTCAAACAATAAGTTTTCTGGTAACTTGCCTGGCTTATCCAGAATCTCAAGTTTGAATGTGTTTCTCGCCCAGAACAATAACCTCAGTGGGGTCATACCTGGGTTTGATTTCACCAACCTTTATAAATTCAATGTTTCATTTAACAATTTTAGTGGCCGAATTCCAGATGTGCATGGCCGTTTCTCAGAAGATAGCTTTCTGGGTAATCCTGAACTTTGTGGACAACCATTGCAGAAGAACTGTCCTATTCTTACTCTTGATGAAAAATCAGAACAATCCAATGGATCAAATGGATCAAAGGGTCCTTCTAAAGATCAAATGTTAATGTATTCAGGATATGCTGCATTGGGTTTGGTAATTATCCTTTTCGTACTTTATAAACTATGTACAAGGAAGAAAACAACCCAGAAGGCTGAAGCATCAAGTAGTGATCATGATGTGTTGGACAAACCTAGCAATTATGCTTCAAGTGGACAAAAATCAGTAACAAGCAGATCCGAGTTTTCAGTGAACTCTGAAAGTGGGATGGTTTCACAATCACTAATAGTTCTTACACAATCAGTAGGGAGTGAATTGAGAATTGAGGATTTGCTGAGAGCCCCTGCAGAATTGCTTGGCAAAGGCAAGTATGGTAGTCTTTATAAGGTGATGCTGGACAACGGGAAGAGAGTGGTTGTGAAAAGGATCAAGAATTTGGCTACTTCAAGCCATGAATTCAAGCAAAAAATGGAAACTTTGGGCCAAGTGAAGCACCCTTATGTGCTCTCACCACTTGCTTTCTATTGTTCCAATCAAGAGAAGCTTCTGGTCTACGAATTCCAGGAAAATGGAAGCTTGTTCAAGCTTCTTCATGGCGAGTCAAAAGGATTTGATTGGAGCAGCAGGCTAGAAATTGCAGCTGTGATAGCAGAGGGATTAGCTTTCATGCATCAAGAGGTTGGGGGGAAAGGAATTGCACATGGGAACTTGAAATCCTCCAATATTTTGCTGAGCTATAACATGGAGGCACGCATAAGCGAGTATGGTGTGATGAACATGGACGATGAACTGAGCTCATCTTCTGCAAGTTCTCGTCCTTCTGGTTCTTCTGGGCCACCGAATGCATTGAAGGCAGATGTGTATGGATTTGGAGTAATTCTTCTTGAGCTACTCACAGGGAGGTTAGTGAAGAACGATGGGATTGATTTGGCAGAGTGGGTTCAATCTGTCGTGAGGGAAGAATGGACCGGTGAGGTGTTTGACAAAGAACTGAGATCAGAGTATGCGAGTGAAGAGAGGTTGGTGAGTTTGCTTCGAGTGGCTATCAAATGTGTTCATCGTTCCCCAGAAGCTAGGCCAAGTATGAATCAGGTGGCTCTCATGCTTAACACTATCAAAGACGAAGAAGAGAAATCTTTGATCCATGAATTAGCAACAGATGTTCAACCACTAACTGATTTATGA 1905 0.4157 MERIPMWVVLFSCIFFINVTHCVEDEVKSSMISFLAKLSGQQSFSSLNWKADSDPCKDLWHGVACDSRNVSVRRLFLDWLNLSGTLDAAILCNSQPLADSLMILNLDGNNVNGGISDEIGNCKQLTRLYVGGNQLSGEIPPSLAMLNNLKRLDISNNKFSGNLPGLSRISSLNVFLAQNNNLSGVIPGFDFTNLYKFNVSFNNFSGRIPDVHGRFSEDSFLGNPELCGQPLQKNCPILTLDEKSEQSNGSNGSKGPSKDQMLMYSGYAALGLVIILFVLYKLCTRKKTTQKAEASSSDHDVLDKPSNYASSGQKSVTSRSEFSVNSESGMVSQSLIVLTQSVGSELRIEDLLRAPAELLGKGKYGSLYKVMLDNGKRVVVKRIKNLATSSHEFKQKMETLGQVKHPYVLSPLAFYCSNQEKLLVYEFQENGSLFKLLHGESKGFDWSSRLEIAAVIAEGLAFMHQEVGGKGIAHGNLKSSNILLSYNMEARISEYGVMNMDDELSSSSASSRPSGSSGPPNALKADVYGFGVILLELLTGRLVKNDGIDLAEWVQSVVREEWTGEVFDKELRSEYASEERLVSLLRVAIKCVHRSPEARPSMNQVALMLNTIKDEEEKSLIHELATDVQPLTDL 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1029 634 ProSitePatterns Protein kinases ATP-binding region signature. 359 381 IPR017441 GO:0005524
Lele27g1029 634 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 91 186 - -
Lele27g1029 634 SUPERFAMILY Protein kinase-like (PK-like) 357 609 IPR011009 -
Lele27g1029 634 PANTHER OS05G0588300 PROTEIN 9 614 - -
Lele27g1029 634 MobiDBLite consensus disorder prediction 293 315 - -
Lele27g1029 634 Pfam Protein kinase domain 357 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g1029 634 Gene3D Transferase(Phosphotransferase) domain 1 429 629 - -
Lele27g1029 634 ProSiteProfiles Protein kinase domain profile. 353 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g1029 634 Gene3D Ribonuclease Inhibitor 190 235 IPR032675 -
Lele27g1029 634 SUPERFAMILY L domain-like 51 230 - -
Lele27g1029 634 Gene3D Ribonuclease Inhibitor 25 189 IPR032675 -
Lele27g1029 634 MobiDBLite consensus disorder prediction 301 315 - -
Lele27g1029 634 Gene3D Phosphorylase Kinase; domain 1 324 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1029 Lele-ChrLele27 17878734 17881413 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1029 1 613 Receptor kinase-like Gene Family AT3G08680 34.365 8.59e-99 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele27g1029 Pkinase 4.7e-25 CL0016