Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1023 ATGGAGCTACCACTTACCTTACTTTTGCAAGCACCCATGATGTTCAAGTCCTTAATTTCTGCAATTGTTTCACTAAGCTTCTTACTATTCTTCTTCTCTGGCACAACTGTAGCTGATCTGAACTCTGATATACAAGCTCTCTTAGAGTTTGCTTCCAGTGTCCCACATGCACGAAGACTCAACTGGAATTATTCTGCTCCAATTTGCAGCTCATGGGTGGGTGTGACTTGCAACTCGGATAAAACTCGGGTCCTTGCTATTCATCTTCCTGGAATTGGCCTCAAAGGTCACATTCCAGAAAACAGCATAGGAAAGCTAGATGCCCTTACAGTACTGAGTCTTCACACCAATGGCCTTAATGGGAAGCTTCCTTCAGACATCCTTTCAATTCCTGCACTTGAGTATGTACATCTCCAGCAGAATAACTTCTCTGGTCCAATCCCTTCATCTGTCTCTCCCAAACTCATTGCACTTGATATTTCTTTGAACTCCTTCTCTGGTACTATCCCACCTACATTTGTTAATCTCAGAAGACTCGCCTGGTTGTATTTTCAAAACAATTCCATCTCTGGACCTATCCCTGACTTCAACCTCCCAAAGCTCAAATTTCTCAATTTCAGTTATAATAACTTGAGTGGCTCAATTCCAAACTCCATCCAGAAATTTCCTCACAGTTCTTTTCTTGGGAACTCTCTTTTGTGTGGGCCACCTCTGAATCATTGCTCTGCAATCACCCATTCTGGATCTCCTCCATCTGCTAACCACTCAGTCACTCCAGCAAGTACCCAAAGTCAAAAAGCTACCAACCCAAAGAAAAGACTTGGATTGGCTTCTATACTTGCCCTGGTAATTGGGGGCTGCGCATTCTTAGCTCTCCTAGTTTTGGTAATCTCTTTGTGCTGTTGTAGGAAGAAAAACGGTCAAAGCAGTGGCATACTGAAAGCAAAGGCAGCTTGTGCAGGAAAGAATGAGATTTCAAAGAGTTTTGGAAGTGGAGTACAAGAGGCTGAGAAGAACAAGTTGTTCTTCTTCAGAGGTTGCTCTTATACCTTTGATCTTGAGGATTTGCTAAAGGCCTCAGCTGAAGTTCTTGGAAAGGGAAGCTATGGTACAGCTTACAAGGCTGTTTTGGAGGAAGGAACAACAGTGGTAGTTAAGAGGTTGAAGGAAGTTGTGGCCGGAAAGAAGGAGTTTGAACAGCAGATGGATATTGTGGGCAGAGTAGGAAGCCACCCTAATATCATGCCTCTTCAAGCTTATTACTATTCCAAAGATGAGAAACTTCTAGTTTGCAGCTTCATGCCACGCGGAAGCTTATTTGCCTCATTGCATGGAAACAGGGGAGAAGGAAGAACTCCACTAGACTGGGATGCAAGAATGAAGATCGCACTTGGAGTTGCCAAAGGAATCGCTTTCATACACTCCGAAGGGGGTCCAAAATTCACACACGGCAACATCAAGTCCACCAATGTCCTCCTAACTCAAGACTTCGATGGCTGCATCTCCGACGTCGGATTGCCTCCACTGATGAGCACTCCGGCAACCATGTCCAGATCTAACGGCTACCGAGCACCAGAGGTGATGGACGCCCGAAAAATCACCCACAAATCCGATGTCTACAACTTCGGGGTGCTCCTCCTGGAAATGCTGACGGGGAAATGCCCGATGAGATACCCCGGGCATGACGAGGTGGTGGATCTGCCGAGGTGGGTGAGGTCCGTGGTTCGAGAGGAATGGACGGCGGAAGTGTTCGACGAGGAGCTACTGAGAGGGCGATATGTGGAAGAGGAAATGGTTCAGATGCTTCAGATTGCGCTGGCCTGCGTGGTGAAAGTGCCGGATATGAGGCCAAGGATGGAGGAAGCTGTGAGAATGGTGGAGGAAATCAGGCAGCCGGAGTTGAAGAACAGGCCTTCCTCCGAGTCCGAGTCCAATTTGCAAACACCTTGA 1950 0.4672 MELPLTLLLQAPMMFKSLISAIVSLSFLLFFFSGTTVADLNSDIQALLEFASSVPHARRLNWNYSAPICSSWVGVTCNSDKTRVLAIHLPGIGLKGHIPENSIGKLDALTVLSLHTNGLNGKLPSDILSIPALEYVHLQQNNFSGPIPSSVSPKLIALDISLNSFSGTIPPTFVNLRRLAWLYFQNNSISGPIPDFNLPKLKFLNFSYNNLSGSIPNSIQKFPHSSFLGNSLLCGPPLNHCSAITHSGSPPSANHSVTPASTQSQKATNPKKRLGLASILALVIGGCAFLALLVLVISLCCCRKKNGQSSGILKAKAACAGKNEISKSFGSGVQEAEKNKLFFFRGCSYTFDLEDLLKASAEVLGKGSYGTAYKAVLEEGTTVVVKRLKEVVAGKKEFEQQMDIVGRVGSHPNIMPLQAYYYSKDEKLLVCSFMPRGSLFASLHGNRGEGRTPLDWDARMKIALGVAKGIAFIHSEGGPKFTHGNIKSTNVLLTQDFDGCISDVGLPPLMSTPATMSRSNGYRAPEVMDARKITHKSDVYNFGVLLLEMLTGKCPMRYPGHDEVVDLPRWVRSVVREEWTAEVFDEELLRGRYVEEEMVQMLQIALACVVKVPDMRPRMEEAVRMVEEIRQPELKNRPSSESESNLQTP 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1023 649 Pfam Leucine Rich Repeat 200 222 IPR001611 GO:0005515
Lele27g1023 649 SUPERFAMILY Protein kinase-like (PK-like) 362 627 IPR011009 -
Lele27g1023 649 MobiDBLite consensus disorder prediction 630 649 - -
Lele27g1023 649 SUPERFAMILY L domain-like 53 239 - -
Lele27g1023 649 FunFam Leucine-rich repeat receptor-like protein kinase 42 152 - -
Lele27g1023 649 Gene3D Ribonuclease Inhibitor 153 243 IPR032675 -
Lele27g1023 649 PANTHER OS05G0588300 PROTEIN 23 641 - -
Lele27g1023 649 FunFam pollen receptor-like kinase 1 326 433 - -
Lele27g1023 649 ProSitePatterns Protein kinases ATP-binding region signature. 364 395 IPR017441 GO:0005524
Lele27g1023 649 Pfam Protein kinase domain 362 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g1023 649 Gene3D Phosphorylase Kinase; domain 1 324 433 - -
Lele27g1023 649 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 434 640 - -
Lele27g1023 649 Gene3D Ribonuclease Inhibitor 42 152 IPR032675 -
Lele27g1023 649 FunFam Leucine-rich repeat receptor-like protein kinase 153 241 - -
Lele27g1023 649 Pfam Leucine rich repeat N-terminal domain 41 78 IPR013210 -
Lele27g1023 649 Gene3D Transferase(Phosphotransferase) domain 1 434 647 - -
Lele27g1023 649 ProSiteProfiles Protein kinase domain profile. 358 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1023 Lele-ChrLele27 17847442 17849884 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1023 18 644 Receptor kinase-like Gene Family AT5G58300 58.983 0.0 737
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele27g1023 Pkinase 1.5e-32 CL0016