Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1020 ATGTTGGTGAGCGCAGAGAAAGCCATGCCTGCGACTGTGAGGGAGGAAGGGGTCGACATGATGACAGAAACAAGAGCGATTCCCTTGAAGCAGCAGCACTTTGTTCTGGTACATGGCATAGGAGGAGGAAGTTGGTGCTGGTATAAAATTCGGTGCCTTATGGAGAATTCTGGATACAAGGTCTCATGCATAGACCTCAAAAGTGCTGGAATTGATCGATCTGATGCCGATTCTATTATTTCCTTTGATGATTACAATCAACCTCTCATGGATTTCATGTCTGCTTTGCCTGAGAATGAACAGGTGATATTGGTGGGACATAGCGCCGGAGGGTTGAGTATTACTCAGGCCTGTCACAAGTTTTCAAAGAAGATCCGATTAGCAGTGTATTTAGCAGCAACTATGCTCAAGCTGGGATTCCAGACAGAAGAGGATATGAAAGACGGGATACCTGAGTTATCTGAGTTTGGGGACGTGTACGAGCTAGGATTTGGATTGGGAAAGGAGAAGCCCCCAACCAGTACAGTGGTGAAGAAAGAGTTTCAACGCAAAATCATATACCATTTGAGCCCCCATGAGGATTCAACCCTAGCGGCGATGCTTTTGAAGCCCGGGCCGGTTCAAGCTCTGACGAGCGCGCGATTTGACGAAAAAGGGGAAGTGGAGAAGGTGAGGCACGTGTACATAAGGACGAAGCAGGATAAGGTGGTGAAGGGAGACCAACAGGAGTCGATGATAAAGAAGTGGCCACCATGTGCAGTGTATGAACTGGACAGTGACCATAGCCCCTTCTTCTCCACGCCATTCGTCCTCTTTGGCCTGCTCGTGAAAGCTGCTGCAGCTTTTTGA 849 0.4829 MLVSAEKAMPATVREEGVDMMTETRAIPLKQQHFVLVHGIGGGSWCWYKIRCLMENSGYKVSCIDLKSAGIDRSDADSIISFDDYNQPLMDFMSALPENEQVILVGHSAGGLSITQACHKFSKKIRLAVYLAATMLKLGFQTEEDMKDGIPELSEFGDVYELGFGLGKEKPPTSTVVKKEFQRKIIYHLSPHEDSTLAAMLLKPGPVQALTSARFDEKGEVEKVRHVYIRTKQDKVVKGDQQESMIKKWPPCAVYELDSDHSPFFSTPFVLFGLLVKAAAAF 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1020 282 PANTHER METHYLESTERASE FAMILY MEMBER 31 279 IPR045889 -
Lele27g1020 282 FunFam putative methylesterase 11, chloroplastic 28 281 - -
Lele27g1020 282 Pfam Alpha/beta hydrolase family 34 268 IPR000073 -
Lele27g1020 282 Gene3D alpha/beta hydrolase 28 282 IPR029058 -
Lele27g1020 282 SUPERFAMILY alpha/beta-Hydrolases 33 276 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1020 Lele-ChrLele27 17833980 17836502 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1020 30 135 Miscellaneous Gene Families AT5G10300 41.509 1.17e-27 104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0124 01 725542 729406 Lele27g1020 27 17833980 17836502 CCT
Lele03g0123 03 695231 699711 Lele27g1020 27 17833980 17836502 CCT
Lele25g1055 25 6824671 6827256 Lele27g1020 27 17833980 17836502 hybridization
Lele26g1061 26 6868421 6871004 Lele27g1020 27 17833980 17836502 hybridization