Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1016 ATGTGCCATATCCAAACACGAATGCTTCGGAGTTGGACCAGGACCTCGCCATTGCCATTGCCCCCTCTGAGGATGCTATCATCGTGGTCGTCACCATCGTCTTCTGGTGCTTGTGACATTAGACGACCCTCCTTTCTCAGAAGCACTTCTTCAAATCCCAGAATCTCCCTCCCTCATCTTCCTCCTCTGTCTTCAACCTCTCATACTAGCCCTCAAAGAATGACGCTTTCGACCAGCTGTTTTGGGGTCAGTAGCCCCATTCCCATATCCGGAAAACCCGATTTGGAAAACCAAGAACCCGAATCCGATGACCCTCAGTCGCTTGTGGTGGTGTCGTTCTACAAGTTCGCGGATTTCCCTGACCACGCCAACTTGCGGAAACCCTTGAAGTCACTCTGTGAAGAACTGCGCGTTTCAGGGGGTATCATTCTTGCGCCTGAAGGAATCAATGGCAGCATATGTGGCACTCGCGAGTCAGTGGGGAAAGTTCTTGCGTTTATACAAAGTGATAACCGTCTTAAGGGTCTAAGACAAGTGGAATCACCTGTGAGTCCTGAGGAAGAAGCTATTCATCATGGACATAGTGCCAGTTCTCCTCTTGCTGCAGGGGAAGATGCACCTTTCCGATGGGATCATGTGAGGGTTAAGTTGAAGAAAGAGATTGTTACGCTTGGGATGCCTGCTGTATCACCTACCGAAAGGGTTGGAAAGTATGTGAGCCCGAGAGATTGGAATGCATTGATCAGTGACCCGGATGTAGTGGCGATTGATGTGCGGAACGATTATGAAACCAGAATAGGAAAGTTTAAAGGAGCCGTTAATCCATGTACGTCATCATTTCGTGAATTCCCTTCTTGGGTGGAGGATCATTTTGAGCTTACTAGAAACAATGGCAAGCCTGCAATAGTTGAGGCAAACAATTCAGGTGAAAGTGTAGAAAAGGAATCACAAAATCCTGAACCTGAACATATACCACGTGTTGCAATGTATTGCACTGGAGGTATTCGATGTGAAAAAGCTTCAAGTTTGCTCCTCAGTAAAGGTTTCAAAGAGGTGTATCACTTGGAAGGTGGAATTCTGAAATATCTGGAGGAAGTGCCAAAAACAGAAAGTCTTTGGCAGGGTGAGTGCTTTGTGTTTGACAAGCGAGTCTCTGTGGAGCATGGTTTGGTGCAAGGCAATTTCAAGCTATGCTATGGTTGTAAGCAGCCTGTGAGTGATGCTGACATGGAAGCTTCGGAATTCGAATATGGAGTTTCTTGCCCACACTGTTTTTCGCAGAAATCAGAGGAAGAGAAGGAGAGGGCTCGAGCTCGGCAAAGACAGTTTGAGAGATGGGGAATCATAGGCGGTCCAGACAAAGGTCGCCGACCAACAAGTAAACTGGATAGCGGCAGTAGGAAATCTGACAAGCTTTCACGGTCAATTTAA 1431 0.4717 MCHIQTRMLRSWTRTSPLPLPPLRMLSSWSSPSSSGACDIRRPSFLRSTSSNPRISLPHLPPLSSTSHTSPQRMTLSTSCFGVSSPIPISGKPDLENQEPESDDPQSLVVVSFYKFADFPDHANLRKPLKSLCEELRVSGGIILAPEGINGSICGTRESVGKVLAFIQSDNRLKGLRQVESPVSPEEEAIHHGHSASSPLAAGEDAPFRWDHVRVKLKKEIVTLGMPAVSPTERVGKYVSPRDWNALISDPDVVAIDVRNDYETRIGKFKGAVNPCTSSFREFPSWVEDHFELTRNNGKPAIVEANNSGESVEKESQNPEPEHIPRVAMYCTGGIRCEKASSLLLSKGFKEVYHLEGGILKYLEEVPKTESLWQGECFVFDKRVSVEHGLVQGNFKLCYGCKQPVSDADMEASEFEYGVSCPHCFSQKSEEEKERARARQRQFERWGIIGGPDKGRRPTSKLDSGSRKSDKLSRSI 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1016 476 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 97 440 IPR020936 -
Lele27g1016 476 CDD RHOD_YceA 236 364 - -
Lele27g1016 476 MobiDBLite consensus disorder prediction 49 75 - -
Lele27g1016 476 MobiDBLite consensus disorder prediction 432 476 - -
Lele27g1016 476 Gene3D - 223 406 IPR036873 -
Lele27g1016 476 MobiDBLite consensus disorder prediction 456 476 - -
Lele27g1016 476 MobiDBLite consensus disorder prediction 180 201 - -
Lele27g1016 476 Gene3D - 96 222 - -
Lele27g1016 476 Hamap tRNA uridine(34) hydroxylase [trhO]. 106 408 IPR020936 -
Lele27g1016 476 Pfam Rhodanese-like domain 244 364 IPR001763 -
Lele27g1016 476 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 218 397 IPR036873 -
Lele27g1016 476 ProSiteProfiles Rhodanese domain profile. 249 371 IPR001763 -
Lele27g1016 476 Pfam UPF0176 acylphosphatase like domain 109 221 IPR040503 -
Lele27g1016 476 SMART rhod_4 239 368 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1016 Lele-ChrLele27 17808818 17812329 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1016 96 476 Sulfurtransferasese or Rhodanese AT2G40760 75.718 0.0 598
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1059 25 6847376 6850885 Lele27g1016 27 17808818 17812329 hybridization
Lele26g1066 26 6890434 6894311 Lele27g1016 27 17808818 17812329 hybridization