Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1002 ATGTCGTTTCCCAACCATCCTCCCTCCTCCTCTCGAGCCCCCTTCCACCGCCGCGCCCAATCCGAAGGCCAATTCCGATTGCCCGACAACTTCGATCTCGAACCTTCCCCCTTCGATGCCCCTTCTTTCGCCTACCAAGATCTAGCCGCATCTGAGGACGACCTCTTCTCCGCCTATATGGATCTTGACAAATCCGGATCCCAACTTCACTCTCTTTCATCCGACCCCAAACCTGGAACCTCCGACTCTCATGATGCCAATGCCGCACCCGCTGGGACTAGCGCTGACGGTGATAATCCTCCCACGCCTCGGCATCGCCACAGCAATTCAGCCGATGGCACTTTCTTGCTCGGGGCCATTGACGCTAAGAAGGCAATGGCTCCCGAAAAGCTTGCCGAATTGTGGATTGTCGATCCTAAGCGAGCAAAGAGGATTCTGGCAAATCGCCAATCTGCCGCTCGTTCAAAAGAGAGGAAAACGCGCTATGTATTAGAACTTGAGAAAAAAATTCAAACCCTTCAGATAGAAGCAACCACTCTTTCGGCTCAATTAAATCTTTTCCAGAGAGATACATCTGGTTTGACTAGTGAAAATACAGAGCTGAAACTTCGGTTACAAGCTATGGAGCAACAAGCTAAGTTACGTGATGCTCTAAATGAAGCACTGAAGAAAGAGGTTGATAGGCTTAAGGTTGCCACTGGAGAGACAGTAAATCCATACTTAACCCAAACCTGTAATATGCAAGCGCATCAAATTCCATACTCTCAAGGTTCTTTCTTCTTACATCAGCCAGAGTGTGGACCATCTGGTGAACCTCAGATCATGCAAATGCAGCAGTTACATGCACTCTCATCTAATTTTTCAAATCCTCATCATCAGCCTCTGCTTGCGGTAGCCAGCCTGCACGACATGTCGGAAATGTTGCCTCAGGAATCTATTGGCCAATTTCAGGGGCTTGAGATAAGCACCGGGGGTGCTCCCATTCTGACGCCTGATGGTTCCTCTGGTTCTGTCAAACAAATCAGCGGTGCCTTTTGA 1038 0.4923 MSFPNHPPSSSRAPFHRRAQSEGQFRLPDNFDLEPSPFDAPSFAYQDLAASEDDLFSAYMDLDKSGSQLHSLSSDPKPGTSDSHDANAAPAGTSADGDNPPTPRHRHSNSADGTFLLGAIDAKKAMAPEKLAELWIVDPKRAKRILANRQSAARSKERKTRYVLELEKKIQTLQIEATTLSAQLNLFQRDTSGLTSENTELKLRLQAMEQQAKLRDALNEALKKEVDRLKVATGETVNPYLTQTCNMQAHQIPYSQGSFFLHQPECGPSGEPQIMQMQQLHALSSNFSNPHHQPLLAVASLHDMSEMLPQESIGQFQGLEISTGGAPILTPDGSSGSVKQISGAF 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1002 345 SMART brlzneu 136 200 IPR004827 GO:0003700|GO:0006355
Lele27g1002 345 CDD bZIP_plant_RF2 141 190 IPR044759 GO:0003700|GO:0006355
Lele27g1002 345 MobiDBLite consensus disorder prediction 66 81 - -
Lele27g1002 345 FunFam probable transcription factor PosF21 139 192 - -
Lele27g1002 345 Pfam bZIP transcription factor 140 198 IPR004827 GO:0003700|GO:0006355
Lele27g1002 345 MobiDBLite consensus disorder prediction 328 345 - -
Lele27g1002 345 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 7 293 - -
Lele27g1002 345 Coils Coil 156 183 - -
Lele27g1002 345 MobiDBLite consensus disorder prediction 1 17 - -
Lele27g1002 345 MobiDBLite consensus disorder prediction 324 345 - -
Lele27g1002 345 MobiDBLite consensus disorder prediction 66 111 - -
Lele27g1002 345 Gene3D - 140 191 - -
Lele27g1002 345 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 138 201 IPR004827 GO:0003700|GO:0006355
Lele27g1002 345 SUPERFAMILY Leucine zipper domain 140 194 IPR046347 GO:0003700|GO:0006355
Lele27g1002 345 MobiDBLite consensus disorder prediction 1 38 - -
Lele27g1002 345 Coils Coil 191 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1002 Lele-ChrLele27 17700124 17703041 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1002 8 325 bZIP Transcription Factor Family AT2G40620 52.537 4.49e-94 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele27g1002 bZIP_1 9.8e-08 CL0018