LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele27g0997	ATGGATCCTGAATATGGCAAGTGTTGGGACACCTCAAAGAAGAATTCTTGGAAGACTATTATGCTCTTGGCATACCAAAGCCTTGGTGTGGTTTATGGGGATTTGAGCATTTCTCCGTTATATGTTTACAAGAGTACATTTGCGGAAGACATCCAACACTCGGAGACAAATGAAGAAATTTTTGGAGCTCTTTCTTTTGTCTTCTGGACTCTGACATTGGTGCCACTATTCAAGTATGTGTTTGTGGTCCTTCGAGCTGATGATAACGGAGAGGGCGGTACTTTTGCCCTATATTCCTTGATTTGCAGGCATGCCAAAGTTAGCCTTCTACCCAACAGGCAGATTGCTGATGAAGCGCTGTCTACTTATATAATGGAGCAGCCTCCTGAGAGAAATAGTTCTAGAGTGAAAAAACTACTTGAGAAGTACAAGGCCCTGCACACGGCTCTGCTAATTGTGGTTCTTCTTGGCACCTGTATGGTAATTGGGGATGGACTTCTTACTCCAGCCATTTCTGTTTTCTCGGCAGTTTCTGGTCTTGAGGTATCCATGTCCAAGAAACACCACCAGTATGCTGTCATCCCAATCACCTGTTTCATACTGGTGTGCTTATTTGCACTTCAGCACTATGGTACACACAGAGTGGGATTCCTTTTTGCACCAATTGTGTTGACATGGCTCCTATGCATCAGTACACTTGGCTTATATAATATATTCAAATGGAATCCTCATGTATATAAAGCCCTTTCACCATACTACATGTTCAGATTTTTGAAGAAGACGAGGATAAGTGGATGGATGTCTTTGGGCGGAATACTGCTGTGCATAACAGGCTCGGAAGCTATGTTTGCTGATCTTGGGCATTTCTCATATGCGGCCATTCAGATTGCATTCACCTTTCTGGTATATCCTGCACTTATATTGGCATATATGGGTCAAGCTGCCTACCTGTCATATCATCATCATCCCAGTCACGAGATCAGTTTCTATGTCTCAGTTCCAGATAAGGTGAGGTGGCCAGTGCTTGTGTTGGCTATTTTAGCTTCTGTTGTGGGAAGCCAAGCGATCATCAGTGGAACGTTTTCCATCATAAATCAGAGCCAGTCGCTTGGTTGCTTCCCAAGAGTGAAGGTTGTTCATACATCCGACAAGATACATGGTCAGATCTACATACCGGAAATCAATTGGATCCTAATGATCCTATGTATCGCAGTGACCATCGGATTCAGGGATACAAAACACATGGGAAATGCATCTGGGCTAGCAGTCATGACTGTGATGCTAGTGACGACATGCCTGACCTCCTTGGTGATTGTAGTTTGTTGGCATAAACCCCCAATCATAGCTCTCTGCTTCCTGCTGTTTTTCGGTTCTGTTGAGCTGTTATATTTCTCGGCTTCGCTGACAAAGTTCCGGGAGGGTGCGTGGCTTCCTATCCTCCTTGCCCTCTTCCTTATGACCATAATGCTGGTTTGGCACTATGCAACCATCAAGAAATATGAATTTGACCTCCACAACAAGGTTTCCCTAGAGTGGCTGTTAGCCTTAGGTCCGAGCTTGGGAATTGCTCGTGTGCCCGGCATAGGCCTAGTGTTCACTGATCTGACATCTGGCATCCCGGCTAACTTCTCCCGCTTCGTCACCAACCTCCCAGCATTCCACCGCGTCCTTGTCTTTGTATGCATAAAATCAGTTCCAGTCCCTCATGTCCCTTCCGCAGAAAGGTACCTTGTTGGCCGGGTAGGACCAGCCAATCATCGGTCCTACCGGTGCATAGTCAGATATGGATACCGCGATGTTCATCAGGATGTTGACTCCTTTGAATCTGAACTAGTAAAAAAGTTAGCTGACTTCATCCGCTATGATTGGTACCGGTCACGAGTATCCAACATAAGCACCGAGGACGATGCTTCAAACTCCAACGAGTCAGGAAGTCACAGATTGACAGTGATAGGAACAATTGGATTCTCCGGGATGCCAGCTTATGATATTGAGGAGACAGTGCAGCCAGCAAGCGTATCTGTGGGGTTCCCAACCGTAGAAAGCGTGGCAGACGTCATAGAGATGGAACCGATGAGTGTGACTCAAAGAAGAGTAAGATTTGCCATTGATGATGAGAACGGGACGAAGAGTGAGATAGGGGTGGAAATGCAAGAAGAACTGGAAGATTTATACAATGCTCAGCAAGCAGGGACAGCATTTATATTAGGGCATTCCCATGTGAGAGCAAAGCAAGGGTCGTCTCTGATAAAGAGAATGGCTGTGAACTATGGCTACAATTTCCTGAGAAGGAACTGTAGAGGCCCTGACGTGGCGCTTAAGGTTCCACCAGTGTCTCTCCTGGAGGTTGGCATGGTTTATGTGGTGTAG	2370	0.4595	MDPEYGKCWDTSKKNSWKTIMLLAYQSLGVVYGDLSISPLYVYKSTFAEDIQHSETNEEIFGALSFVFWTLTLVPLFKYVFVVLRADDNGEGGTFALYSLICRHAKVSLLPNRQIADEALSTYIMEQPPERNSSRVKKLLEKYKALHTALLIVVLLGTCMVIGDGLLTPAISVFSAVSGLEVSMSKKHHQYAVIPITCFILVCLFALQHYGTHRVGFLFAPIVLTWLLCISTLGLYNIFKWNPHVYKALSPYYMFRFLKKTRISGWMSLGGILLCITGSEAMFADLGHFSYAAIQIAFTFLVYPALILAYMGQAAYLSYHHHPSHEISFYVSVPDKVRWPVLVLAILASVVGSQAIISGTFSIINQSQSLGCFPRVKVVHTSDKIHGQIYIPEINWILMILCIAVTIGFRDTKHMGNASGLAVMTVMLVTTCLTSLVIVVCWHKPPIIALCFLLFFGSVELLYFSASLTKFREGAWLPILLALFLMTIMLVWHYATIKKYEFDLHNKVSLEWLLALGPSLGIARVPGIGLVFTDLTSGIPANFSRFVTNLPAFHRVLVFVCIKSVPVPHVPSAERYLVGRVGPANHRSYRCIVRYGYRDVHQDVDSFESELVKKLADFIRYDWYRSRVSNISTEDDASNSNESGSHRLTVIGTIGFSGMPAYDIEETVQPASVSVGFPTVESVADVIEMEPMSVTQRRVRFAIDDENGTKSEIGVEMQEELEDLYNAQQAGTAFILGHSHVRAKQGSSLIKRMAVNYGYNFLRRNCRGPDVALKVPPVSLLEVGMVYVV	789

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele27g0997	789	TIGRFAM	kup: potassium uptake protein	23	788	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Lele27g0997	789	Pfam	K+ potassium transporter	25	599	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Lele27g0997	789	PANTHER	OSMOTIC STRESS POTASSIUM TRANSPORTER	12	787	IPR003855	GO:0015079\|GO:0016020\|GO:0071805

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele27g0997	Lele-ChrLele27	17678399	17682607	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele27g0997	1	789	Inorganic Solute Cotransporters	AT2G40540	80.473	0.0	1308