Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0987 ATGGACGATACAACTAGGGTTTCCACTCTGTCCAGTGGAGGGGACGATGTCGTTCGCTTCCCGTTGTCTCCATCGAATGCTTTGGTCATCCAGAAAGGAGACATCACAAAGTGGTCTATCAACGGTTCCTCCGACGCAATAGTGAATCCAGCAAATGAGAGAATGCTTGGAGGTGGTGGTGCTGATGGAGCCATACACAGAGCTGCTGGGCCAGATCTTTATCAAGCGTGCTTCATTGTTCCAGAAGTCAGACCTGGAATTCGCTGTCCGACAGGGGAAGCTAGGATCACACCAGGTTTTAGGCTGCCTGCTTCTCATGTTATTCATACCGTTGGACCAATCTACAATTCAGATTGTAATCCTGCTGCATCTCTGGCAAGTGCTTACAGGAATAGTTTGAGGGTTGCAAAAGATAACAATATTCAGTATATAGCATTTCCAGCCATATCCTGCGGCGTATTTGGATATCCTTTTGATGAAGCTGCCACAGTGGCAATATCTACCATCAAAGAGTTTCGAGATGACTTGAAGGAGGTCCACTTCGTTCTTTTCTCGCCTGATATCTATAATGTTTGGATAAACAAAGCGAGCGAGTTGCTGAAAGAGTAG 609 0.4614 MDDTTRVSTLSSGGDDVVRFPLSPSNALVIQKGDITKWSINGSSDAIVNPANERMLGGGGADGAIHRAAGPDLYQACFIVPEVRPGIRCPTGEARITPGFRLPASHVIHTVGPIYNSDCNPAASLASAYRNSLRVAKDNNIQYIAFPAISCGVFGYPFDEAATVAISTIKEFRDDLKEVHFVLFSPDIYNVWINKASELLKE 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0987 202 SMART YBR022w_8 27 165 IPR002589 -
Lele27g0987 202 Pfam Macro domain 48 165 IPR002589 -
Lele27g0987 202 SUPERFAMILY Macro domain-like 24 194 IPR043472 -
Lele27g0987 202 PANTHER GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED 27 199 - -
Lele27g0987 202 CDD Macro_OAADPr_deacetylase 28 197 - -
Lele27g0987 202 ProSiteProfiles Macro domain profile. 15 200 IPR002589 -
Lele27g0987 202 Gene3D Leucine Aminopeptidase, subunit E, domain 1 15 202 IPR043472 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0987 Lele-ChrLele27 17612264 17614000 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0987 33 116 C2H2 Transcription Factor Family AT5G01310 39.175 1.03e-06 46.6