Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0978 ATGTCCAGAGAAAGGGAAAATTTTGAAGAGATAGGGAAGAAGATCAAGAGGGAGGGAGATGTTTTATCGCAAATGGGAAGAAGACACATGTTGGGTCCTCCTGGAACCCTAAATACCATAACCCCTTGTGCAGCATGTAAGCTCTTGAGGCGAAGATGTGCTCAGGAATGTCCCTTTTCTCCTTACTTTTCCCCTCATGAGCCCCAAAAATTTGCTTCTGTTCACAAGGTCTTTGGTGCCAGCAACGTCTCCAAGATGCTCATGGAAGTACCAGAGAGTCAAAGAGCGGATGCAGCAAATAGTCTAGTGTATGAGGCAAATGTGAGGCTAAGAGACCCAGTTTACGGATGCATGGGTGCAATTTCTGCTTTGCAGCAACAAGTTCAATCTTTACAAGCTGAACTTAATGCAGTAAGGGCTGAAATACTTAAATACAAACTTAGGGAAGCTACTAACATCATACCCTCCTCTCATCATCATCATCATATTCCTGCTGTCCTCCCTAATTCCTCTCGGGCCACCGTGTCAATCGCCGCTCCACCGCCACCGCCTAATTGTTCTCTTCCTACTACTTCTGATTCCTCTTCTTCCATGTATACCCAAATCCAGCAGAGGCCTCCTCCCACCAATTATACCACAATTTCAAGTGATAATATTTCCTATTTTGGTTAA 672 0.4464 MSRERENFEEIGKKIKREGDVLSQMGRRHMLGPPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPQKFASVHKVFGASNVSKMLMEVPESQRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQSLQAELNAVRAEILKYKLREATNIIPSSHHHHHIPAVLPNSSRATVSIAAPPPPPNCSLPTTSDSSSSMYTQIQQRPPPTNYTTISSDNISYFG 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0978 223 Coils Coil 121 148 - -
Lele27g0978 223 MobiDBLite consensus disorder prediction 174 223 - -
Lele27g0978 223 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 38 179 - -
Lele27g0978 223 MobiDBLite consensus disorder prediction 189 223 - -
Lele27g0978 223 ProSiteProfiles LOB domain profile. 41 142 IPR004883 -
Lele27g0978 223 Pfam Lateral organ boundaries (LOB) domain 42 139 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0978 Lele-ChrLele27 17540167 17541271 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0978 27 157 AS2 family AT2G40470 90.977 3.49e-75 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele27g0978 LOB 5.3e-41 No_clan