Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0970 ATGGGTGGAGTCCAAGGGCTCTTAAACATGTTGAACACTGGTAGTGATGACCGAACACGGAAAGCAGCTTTGAAGGCTCTTGATGCACTCTCACAATCAGAAGAAGTTCTTGTATCCTTATATCGTGCTGGAGCAATCACAATTATTAGGTCAGTTCCGAATTCGCTCGAGGATGCGGATGTTGAGAGATTCAAGTTCACCTTGATGAAAAGATTCCAAGATCAGAGATATGATGGGCGATCATGA 246 0.439 MGGVQGLLNMLNTGSDDRTRKAALKALDALSQSEEVLVSLYRAGAITIIRSVPNSLEDADVERFKFTLMKRFQDQRYDGRS 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0970 81 Gene3D - 1 63 IPR011989 -
Lele27g0970 81 SUPERFAMILY ARM repeat 2 51 IPR016024 -
Lele27g0970 81 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0970 Lele-ChrLele27 17487579 17488264 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele27g0970 27 17487579 17488264 Lele25g1107 25 7153415 7160410 CCT
Lele27g0970 27 17487579 17488264 Lele26g1107 26 7155072 7156282 CCT
Lele27g0970 27 17487579 17488264 Lele27g0971 27 17498787 17507618 CCT
Lele27g0970 27 17487579 17488264 Lele28g1100 28 7133272 7138483 CCT
Lele27g0970 27 17487579 17488264 Lele27g0970 27 17487579 17488264 ECH
Lele25g1108 25 7168737 7171282 Lele27g0970 27 17487579 17488264 hybridization
Lele26g1108 26 7166030 7169032 Lele27g0970 27 17487579 17488264 hybridization