Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0965 ATGGTTTCAGTTGATAATTGCAATCCCAATTATGACATCGAGGAAACAAACGATACTGGAATAAAGGATTCTGCTGAAATTGAAATTTCAGCTTCTCCAGAGACCACTATAGGCGGTGAAAATCCTGTGAGAAAGTTCCGAAACACGTTGAACTCTCATCTTTCTAATGGGATTAAGTTTCACAAATTTGATTCCGCATTAGTCAAATCCATGACCAAGAGCAACCAGATTTCACAATCTATGCCTTCTTCTGGTGCATATAGCTTCAGAAAACGGTTTAGTGGCATGTTTACACACAAACTTGACTGGAGTTCCCTCAAGAATATGTTCAAGGAATGGATTAGGAACCCAATGAACATGGCCCTTTTTGGGTGGATCATCTGTGTTGCTATTTCTGGTGCAATTCTCTTCCTTGTCATGACTGGAATGTTGAACAGTGTGCTTCCAAGGAAGTCTCAGAGAAACACATGGTTTGAAATTAACAATCAAATACTCAATGCACTGTTTACACTTATGTGTTTATACCAGCATCCCAAAAGATTCCATCATCTTGTACTTTTGTGCAGATGGAGACAAGATGATACCTTTGCACTTAGAAAGGTATACTGCAAGAATGGAACCTATAAACCACATGAATGGGCACATATGATGGTAGTGGTTCTTCTCCTTCATCTGAACTGTGTTGCTCAATATGCACTTTGTGCTCTAAACTTGGGGTACAAAAGATCAGAGAGACCAGTCATAGGAGTTGGAATTTGTATATCTTTTGCAATAGCTGCACCTGCAATTGCTGGTCTTTATACCATTCTTAGCCCTCTTGGTAGGGATTATGAGTTTGAGATGGATGAAGAAAAACAGGTTCAAACCACTTCATATGAAAAGCCATTGGGGAAAAAATATTCATTTGCAACAAGAGATGAACATAATAGGGTGTTTGAGAATGAACCACAGTGGAGAGGAGGAATACTTGATATTTGGGAGGATATCTCTACTGCATATCTCTCACTCTTCTGCACTTTTTGTGTGTTTGGCAGGAACATAGAGAGACTTGGTTTTGGAAACATGTATGTTCATATTGCTACTTTCATTCTGTTCTGTTCAGCTCCATTCTGGATTTTTATCTTTGCTGCTGTCGACATTGATAATGACAATATTAGAGAGGCTCTAGTGGCGACTGGGATTGTTCTTTGTTTTCTTGGTTTGTTGTATGGCGGCTTTTGGAGGATCCAAATGAGAAAGAGGTTCAATTTACCTGCTTATACCTTCTGTTTCGGTGAACCCTCAATTTCTGACTGCACAATGTGGCTCTGCTGTTGCTGGTGCTCTCTTGCTCAGGAGGCAAGAACTGGGAATTCCTATGATGTTGTAGAGGAAACATTCTGCAGGCAAGAAGATGGAGCGTTGACCACGTCTGACACAAGTTCTTCTCTGGGTAACAACTCTTTAAGTTCAGATATGCCGCTATCCACTGTAAATGACAACGCTTTTGAAACAGGTAAAAATAGAACGATGACCCCACCAAGTCCAGTGTTTATAAGAAGAGATGGCCCTTAG 1554 0.4028 MVSVDNCNPNYDIEETNDTGIKDSAEIEISASPETTIGGENPVRKFRNTLNSHLSNGIKFHKFDSALVKSMTKSNQISQSMPSSGAYSFRKRFSGMFTHKLDWSSLKNMFKEWIRNPMNMALFGWIICVAISGAILFLVMTGMLNSVLPRKSQRNTWFEINNQILNALFTLMCLYQHPKRFHHLVLLCRWRQDDTFALRKVYCKNGTYKPHEWAHMMVVVLLLHLNCVAQYALCALNLGYKRSERPVIGVGICISFAIAAPAIAGLYTILSPLGRDYEFEMDEEKQVQTTSYEKPLGKKYSFATRDEHNRVFENEPQWRGGILDIWEDISTAYLSLFCTFCVFGRNIERLGFGNMYVHIATFILFCSAPFWIFIFAAVDIDNDNIREALVATGIVLCFLGLLYGGFWRIQMRKRFNLPAYTFCFGEPSISDCTMWLCCCWCSLAQEARTGNSYDVVEETFCRQEDGALTTSDTSSSLGNNSLSSDMPLSTVNDNAFETGKNRTMTPPSPVFIRRDGP 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0965 517 PANTHER PLAC8 FAMILY PROTEIN-RELATED 8 514 - -
Lele27g0965 517 TIGRFAM A_thal_Cys_rich: uncharacterized Cys-rich domain 317 449 IPR006461 -
Lele27g0965 517 MobiDBLite consensus disorder prediction 468 517 - -
Lele27g0965 517 Pfam PLAC8 family 318 448 IPR006461 -
Lele27g0965 517 Pfam Protein of unknown function (DUF2985) 112 190 IPR021369 -
Lele27g0965 517 MobiDBLite consensus disorder prediction 468 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0965 Lele-ChrLele27 17469173 17470726 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele27g0964 27 17464577 17465542 Lele27g0965 27 17469173 17470726 CCT
Lele28g1106 28 7166389 7172447 Lele27g0965 27 17469173 17470726 CCT
Lele25g1113 25 7188823 7190376 Lele27g0965 27 17469173 17470726 CCT
Lele27g0965 27 17469173 17470726 Lele25g1111 25 7179707 7184321 CCT
Lele27g0965 27 17469173 17470726 Lele26g1111 26 7177548 7181745 CCT
Lele27g0965 27 17469173 17470726 Lele27g0967 27 17474937 17479237 CCT
Lele27g0965 27 17469173 17470726 Lele28g1104 28 7157705 7161928 CCT
Lele27g0965 27 17469173 17470726 Lele25g1128 25 7271534 7272196 CCT
Lele27g0965 27 17469173 17470726 Lele27g0951 27 17386077 17386739 CCT
Lele27g0965 27 17469173 17470726 Lele27g0965 27 17469173 17470726 ECH
Lele25g1113 25 7188823 7190376 Lele27g0965 27 17469173 17470726 hybridization
Lele26g1113 26 7186322 7186621 Lele27g0965 27 17469173 17470726 hybridization