Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0957 ATGGAGAAGAGAAATGCTCTAGATTGGCACTATATTTTGGAGAAGAAGAGAGAGAAATGGAAGTTTCAATGGCTTCCCTGGATCCTTTGTTTGTGGATTCTTGTGCTGTCCATTTGTTTGAAGCCAGTTTTGGGTGAAGGAGATCGTTGGGATGGAGTGGTTGTCACAGAATCAAATTTCTTGGCACTTCAAGCGTTCAAGCAAGAGCTGATTGATCCCAAAGGCTTCTTGAGAAGCTGGAATGACAGTGGTTTCACTACTTGTTCTGGAGGTTGGGCTGGAATCAAGTGTGCTCAGGGTCAGGTTATAGTGATCCAGCTTCCATGGAAGGGACTGAAAGGTCACATCACAGAGAGGATAGGTCAACTTGAAGGCCTTCGAAAGCTAAGTCTTCATGATAACCAAATTGGTGGTTCGATCCCTTCTTCATTGGGACTCCTTCCTAATCTCAGAGGCGTTCAGCTATTCAACAATCGTCTAGAAGGCTCCATCCCTCCTTCACTAAGTTCTTGCCTTTTGCTTCAGTCCTTAGACTTAAGTAATAACTTACTCTCAGGGAGAATCCCTGATAGCCTATTCAATTCTTCTAAGCTTTATTGGCTTAATTTGAGCTTTAATTCCTTCTCTGGTTCAATACCAGCTTCCCTCACTCGCTCACCTTCTCTCACCTTCGTTTCTCTTCAACACAATAATCTCTCTAGCTCTATCCCAAACTCATGGGGTGGGACTCTTTCTAGACTTCAAACGTTAGATTTTTCAAATAATGCCCTGAACGGAAGTTTGCCTGCTAGTCTCTCTAATTTGTCCTCGCTTACTGTGTTGAATGTTGAGAACAACCACCTCGATGACCAAATCCCAGAATCTCTAGGTAGATTACGTAATCTTTCTGTTCTTAGTTTGAGGGGAAATCAACTTAGTGGTCACATTCCTGAAAGTGTTGGCAACGTTTCCTCCCTTAAACAGCTTGATTTGTCACTGAATAATCTCAGGGGTGAAATCCCATCCTCTTTTGACTATTTACGTGGCCTTGATTTCTTCAATGTTTCTTACAATAACCTATCTGGTCCGGTTCCTTCTCTACTTGCCCAAAAATTTAACTCAAGCTCGTTTTTGGGTAATATTCAACTATGTGGGTACGATCCTTCAATCCCATGTCCTTCTCCAGCACCATCCGAGGTTGTCTCTGCTCCATCCTCTGGAACATCGAAACGCCATCATCTTCGGAAACTACATACTAAAGACATAATTCTCTTAGCAGCAGGGGCTCTCCTCGTACTCCTCGTAATAATATGTTGCATCCTGGTCTTCTTCTTGATCAGAAGAAGAGCAACATCTAGAGAAGAGAAAAAGGCAAGAGCTGGTACTGCTGGAACCGAAAAAGGGGTTGCTTCAGCAGCAGCAGCCGCAGCTGCCGGAGCAGCTGAGGCCGCCGCCGGCGAGGCAGGAGGGAAACTAGTCTATTTTGATGGCCCCACAGCCTTTACAGCCGATGATCTTCTGTGTGCAACCGCAGAGATAATGGGAAAGAGCACCTACGGAACAGTGTACAAAGCCACATTGGAGGATGGAAGTGAGGTTGCAGTGAAGAGACTGAGAGAAAAGATCACAAAGGGCCAGAGAGAATTTGAATCTGAGGTTAACATTCTTGGGAAAATTCGTCACCCAAATCTTTTGGCACTGAGGGCATATTATCTGGGACCCAAGGGGGAAAAGCTTCTGGTTTTTGATTATATGCCCAGAGGAAGTCTTGCTGCTTTCCTACACGCTCGTGGGCCAGAAACAGCCATTGATTGGCCAACAAGGATGAGAATAGCACAAGGCATGGCTCGTGGCTTGTTCTACCTTCATTCCCATGAGAACATCATACATGGGAACCTTACATCCAGCAACGTCCTGCTGGACCAAAACATAAATGCTAAAATCGCAGATTTTGGTCTTTCTAGGTTAATGACAACCGCTGCTAGTTCTAACGTGATCGCCACCGCTGGAGCCTTAGGCTACCGAGCGCCGGAGCTCTCGAAGCTGAAGAAAGCAAACACAAAAACTGATGTATACAGCCTGGGTGTGATCTTGTTGGAACTCCTAACAGGGAAATCACCTGGTGAGGCCAGGGATGGGGTGGATTTGCCTCAGTGGGTTGCCTCCATTGTGAAAGAAGAATGGACGAATGAAGTATTCGACGTGGAGCTCATGAGAGATGCATCTACCATTGGTGATGAGTTGTTGAACACATTGAAGCTTGCTTTGCACTGTGTTGATCCTTCTCCATCAGCACGACCAGAAGTTCAGCAAGTACTACACCAATTAGAAGAGATTAGACCAGAGAGATCAGCAAGATCTGGGGATGATGGAGCCGTTGTAGTAGGAGGAACTTAG 2376 0.455 MEKRNALDWHYILEKKREKWKFQWLPWILCLWILVLSICLKPVLGEGDRWDGVVVTESNFLALQAFKQELIDPKGFLRSWNDSGFTTCSGGWAGIKCAQGQVIVIQLPWKGLKGHITERIGQLEGLRKLSLHDNQIGGSIPSSLGLLPNLRGVQLFNNRLEGSIPPSLSSCLLLQSLDLSNNLLSGRIPDSLFNSSKLYWLNLSFNSFSGSIPASLTRSPSLTFVSLQHNNLSSSIPNSWGGTLSRLQTLDFSNNALNGSLPASLSNLSSLTVLNVENNHLDDQIPESLGRLRNLSVLSLRGNQLSGHIPESVGNVSSLKQLDLSLNNLRGEIPSSFDYLRGLDFFNVSYNNLSGPVPSLLAQKFNSSSFLGNIQLCGYDPSIPCPSPAPSEVVSAPSSGTSKRHHLRKLHTKDIILLAAGALLVLLVIICCILVFFLIRRRATSREEKKARAGTAGTEKGVASAAAAAAAGAAEAAAGEAGGKLVYFDGPTAFTADDLLCATAEIMGKSTYGTVYKATLEDGSEVAVKRLREKITKGQREFESEVNILGKIRHPNLLALRAYYLGPKGEKLLVFDYMPRGSLAAFLHARGPETAIDWPTRMRIAQGMARGLFYLHSHENIIHGNLTSSNVLLDQNINAKIADFGLSRLMTTAASSNVIATAGALGYRAPELSKLKKANTKTDVYSLGVILLELLTGKSPGEARDGVDLPQWVASIVKEEWTNEVFDVELMRDASTIGDELLNTLKLALHCVDPSPSARPEVQQVLHQLEEIRPERSARSGDDGAVVVGGT 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0957 791 FunFam Pollen receptor-like kinase 1 578 783 - -
Lele27g0957 791 Gene3D Ribonuclease Inhibitor 174 282 IPR032675 -
Lele27g0957 791 SMART LRR_typ_2 174 195 IPR003591 -
Lele27g0957 791 SMART LRR_typ_2 147 171 IPR003591 -
Lele27g0957 791 SMART LRR_typ_2 123 146 IPR003591 -
Lele27g0957 791 SMART LRR_typ_2 244 267 IPR003591 -
Lele27g0957 791 SMART LRR_typ_2 292 316 IPR003591 -
Lele27g0957 791 SMART LRR_typ_2 268 291 IPR003591 -
Lele27g0957 791 Pfam Leucine Rich Repeat 174 192 IPR001611 GO:0005515
Lele27g0957 791 PRINTS Leucine-rich repeat signature 174 187 - -
Lele27g0957 791 PRINTS Leucine-rich repeat signature 244 257 - -
Lele27g0957 791 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 184 772 - -
Lele27g0957 791 Gene3D Phosphorylase Kinase; domain 1 507 578 - -
Lele27g0957 791 Pfam Leucine rich repeat 220 281 IPR001611 GO:0005515
Lele27g0957 791 Pfam Leucine rich repeat 293 353 IPR001611 GO:0005515
Lele27g0957 791 Pfam Leucine rich repeat N-terminal domain 61 97 IPR013210 -
Lele27g0957 791 ProSiteProfiles Protein kinase domain profile. 501 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g0957 791 SUPERFAMILY L domain-like 57 358 - -
Lele27g0957 791 Pfam Protein tyrosine and serine/threonine kinase 504 769 IPR001245 GO:0004672|GO:0006468
Lele27g0957 791 SUPERFAMILY Protein kinase-like (PK-like) 505 773 IPR011009 -
Lele27g0957 791 Gene3D Ribonuclease Inhibitor 283 385 IPR032675 -
Lele27g0957 791 Gene3D Transferase(Phosphotransferase) domain 1 579 785 - -
Lele27g0957 791 FunFam Leucine-rich repeat receptor-like protein kinase 486 577 - -
Lele27g0957 791 CDD STKc_IRAK 507 772 - -
Lele27g0957 791 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 96 389 - -
Lele27g0957 791 Gene3D Ribonuclease Inhibitor 59 173 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0957 Lele-ChrLele27 17425595 17428062 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0957 50 774 Receptor kinase-like Gene Family AT3G51740 61.935 0.0 907
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele27g0957 PK_Tyr_Ser-Thr 1.6e-43 CL0016