LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele27g0952	ATGTGGAAGAATGAGATGTTGGAAGTTAGGGTTTCAAATATGGTTTTGAATTTCAAAGTTAGGATAACATCTGACATTGTCAAGGTGATTGATCACTCGGTGAAGCGTACTTGCGCTGTAGAAATTGTATTCAAGCAATCTCTTGTTCATGCCGTGAGAGCCTTTGAGGCACTTCTCTCTGGCTCATGGAAAGCTGTGGAGCTCATAAAAATTGAGGGAGCAACTTCAACCCTGCATTTTACCAATGACCAAAAAAGAGTTTTGAAGAAAGGTCCCGATTCTGACATTCGGATAAGGGCAAGGAAAGCTACTCTTTCAGATTGCTCATGTTTTCTAAGATCTGGAATTGATGTATGCGTGTTATCTGCACCTCAACAGGATAATGATTCAGGGAAAATTTGTCTTGAACCTAACTCAGGATGGCAACAAGATGCAAAGGAGTGGAATGCTGAAAATTTGGAGGCAAAGGCCGATGAGAATGATAGTTTACATCTTTTCTCAGATCACACTTCAACTGATATGCATGAATCTGAAGAAAATGATATCTGGGGACTGATCCCCGAACTTACTACATCTGAGAGAATAGGTGGCTGTGTGATATCTCATTCACCTGGAGCTGGAAAAACTTTTCCAATTATTGCATTTCTTGCAAGCTACTCGAAGTTTTTCCCAGGAAAGAAACCTTTGGTCCTTCCTCCAAAGACAACACTTTATACGTGGTATAAAGAATTTATCAAATGGGAAGTTCCTTTACCAGTGTATCTGATTCAATCTCAACGTAGAGCCCAGGGAGCATGCAAGGAGAAGCCAATGGTTATTCCTGGTTTTCCAAAGCCCTCTGGAGATGCTGATGGGAGAGAATCCAAGGTTTCATACCGAAACTATATGGCTAAAGTCTTGAGGGAAAGTCCAGGGGTTCTTATTCTGGATGAAGGGCACAATCCTAGAAGTACAGAATCATGTTTGAGAAAAGCCTTAATGAAAGTAGAGACGGAATTGAGAATACTACTTTCAGTTGCATTGTTTCAGAACAATTTCTGTGAATACTTCAACATTCTCTGCTTGGCAAGACTAAAATTTGTTCATGAAGTGCGGAGAGAATTAGACCCCAAGTACATGTGGGAAAAAGGTATAACTGAAAGAAAACCGAACTTTATAGAAGCACGGGCAAGAAAGTTCTTCTTAGATAAAATTGCTAAAATAATAGACTCTGATAATAATGATGAGAGGCTGCAGGGTCTAAACATGTTAAGAAAGAATACACGCGAATTTATAGATGTTTATGATGGTGGAAGTTCTGATAATCTTCCTGGTTTGCAATTTTATACATTGTTAATGAATATTACTGATGGTCAAGATCAGATTTTTCGGGCACTCTATGAAAAACTAGCCTACTCTAATCGATATCCTCTTGAGGTGGAGCTTTTGGTAACCCTTGGAGCAATACATCCGTGGCTAATCACAACGGCTGCATGCTCTGATAAGTTTTTAACCGAGGCTCAACGGGGGGAGCTGGAAAAATGCAAGTTTGATTTGAAGATAGGACCAAATGTACGGTTTGTTTTGAGCCTTTCTGACAGCGGCTTCTTGCGTGATTTTGTTGGACTCAGAGTGGAATCCATCAAGAACAAGGCAAGCCATCGGCTGTGCCTACCGTCCCGAACCACTTGGAAAGAGTGGGTTTCAAGGATGATTTTTAGTGAGGACTTTGTGGAGGATAAATCCCAATGGCAACTAGAGAAGCTTGAAGATGATATCCTTCAAGAAATGATTGCAGATGACAGGTCTAAAATATTCCATAGGATAATGAAAGATGAGAAAGCTTCAACCAACTGA	1836	0.4031	MWKNEMLEVRVSNMVLNFKVRITSDIVKVIDHSVKRTCAVEIVFKQSLVHAVRAFEALLSGSWKAVELIKIEGATSTLHFTNDQKRVLKKGPDSDIRIRARKATLSDCSCFLRSGIDVCVLSAPQQDNDSGKICLEPNSGWQQDAKEWNAENLEAKADENDSLHLFSDHTSTDMHESEENDIWGLIPELTTSERIGGCVISHSPGAGKTFPIIAFLASYSKFFPGKKPLVLPPKTTLYTWYKEFIKWEVPLPVYLIQSQRRAQGACKEKPMVIPGFPKPSGDADGRESKVSYRNYMAKVLRESPGVLILDEGHNPRSTESCLRKALMKVETELRILLSVALFQNNFCEYFNILCLARLKFVHEVRRELDPKYMWEKGITERKPNFIEARARKFFLDKIAKIIDSDNNDERLQGLNMLRKNTREFIDVYDGGSSDNLPGLQFYTLLMNITDGQDQIFRALYEKLAYSNRYPLEVELLVTLGAIHPWLITTAACSDKFLTEAQRGELEKCKFDLKIGPNVRFVLSLSDSGFLRDFVGLRVESIKNKASHRLCLPSRTTWKEWVSRMIFSEDFVEDKSQWQLEKLEDDILQEMIADDRSKIFHRIMKDEKASTN	611

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele27g0952	611	Gene3D	-	182	385	IPR038718	-
	Lele27g0952	611	PANTHER	SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED	553	610	IPR044567	GO:0080188
	Lele27g0952	611	ProSiteProfiles	Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile.	189	359	IPR014001	-
	Lele27g0952	611	Pfam	SNF2-related domain	190	363	IPR000330	GO:0005524\|GO:0140658
	Lele27g0952	611	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	196	373	IPR027417	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele27g0952	Lele-ChrLele27	17397488	17402038	Wgd

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TR	SNF2	Lele27g0952		SNF2_N	5.3e-12	CL0023