Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele27g0949 | ATGGACTCTGACTTTCCCAACAAAGCCTTAACGAGAACGCGATTTTGTGAGCTGGACCCACCACTTTCTGAACCGGTTCTCGAAGCCCTATCAGAGTCTGGCTTCGAGTTCTGCACGCCGGTCCAAGCCGCTACAATACCTTTGCTATGCAGTTTTAAGGACGTGGCCGTCGACGCTGCCACCGGTTCAGGCAAGACGCTGGCATTTGTCGTTCCCCTTGTTGAGATTCTCCGCCGGTCCTGTCCCAATCCCAAACTTCATCAGGTATTTGGAATAATTATATCTCCCACAAGGGAGCTGTCATCCCAAATATACCATGTTGCACAACCTTTCATTGAAACTTTAGCTAATGTTAAGTCCATGCTCCTTGTTGGTGGAGTAGACGTAAAAGCAGATATGAAGAAAATTGAGGAAGAAGGAGCTAATATATTGATTGGCACACCCGGGCGGCTATATGACATAATGAATCGAATGGATATATTGGATTTTAAAAGCTTGGAGATTTTAATTTTAGACGAGGCTGATAGACTCTTGGATATGGGATTCCAGAAGCAGATTAATTCCATTATATATCTCTTACCAAAGCTTCGCAGAACAGGTCTATTCTCTGCTACTCAAACTGAGGCTGTTGAAGAGCTTTCTAAAGCGGGGCTGAGGAACCCTGTGAGGGTTGAAGTCCGTGCAGAGTCAAAATCAGTAAATGACCCTGCAGCATCACAACAACCAACCTCTTCAAAGACACCTGCAGGACTTCAAATTGAGTACATGGAATGCGAGGCTGAAAAGAAACCATCTCAGCTTGTTGATATCTTAATGAAGAACCGCTCCAAAAAAATGATAATATACTTCATGACCTGTGCCTGTGTTGACTATTGGGGACTTGTCCTTCCTCGCCTTTCTACTTTGAAAGGTTTTTCCTTGATCCCTCTTCATGGAAAGATGAAGCAGGCTGCTAGGGAGAAGGCATTGGCGTCATTTACATCTCTTTCAACTGGAATACTTCTATGTACAGATGTTGCAGCACGTGGACTTGACATACCTGGAGTTGATTGTATAGTGCAGTATGATCCCCCACAAGATCCAAATGTTTTCATACATAGAGTTGGGCGAACTGCTCGGCTGGGTAAACAAGGACATGCTATTGTCTTCTTATTGCCAAAGGAAGAATCTTATGTGGAATTCCTGCGCGTAAGAAGAGTCCCCCTCCAAGAGAGAAGTTGCTCTAATGATGCATCTGATGTTGTTCCTGAGATTCGTTCTGCTGCCAAAAAAGATCGTGATGTAATGGAAAAAGGACTTAGGGCATTTGTTTCTTATATTCGTGCTTATAAAGAGCATCACTGCTCCTATATTTTTAGGTGGAAAGAACTTGAAATTGGTAAGTTGGCCGTGGGATATGGCTTACTGCAGCTTCCTTCAATGTCAGAGTTAAAACAGCAGTCATTGTCCACGGAAGGTTTTGTACCAGTTGAAGACATTAATTTGGAGGACATCAAGTACAGGGATAAATCTCGTGAAAAGCAAAGGAAGCAAAACCTGCAAGCAAAGAAAGAAGCCAAAGAGAAAGAGACGAAGCCTCAGAAACCCAACAAAACCCCAAAAACTGCCCCTGTAACAAGGAAGAAAACAGCTAAACAAAGACGTGCTCAGCAGTCAGTTGAAGATGAGGATGAGCTTATGTGA | 1683 | 0.4355 | MDSDFPNKALTRTRFCELDPPLSEPVLEALSESGFEFCTPVQAATIPLLCSFKDVAVDAATGSGKTLAFVVPLVEILRRSCPNPKLHQVFGIIISPTRELSSQIYHVAQPFIETLANVKSMLLVGGVDVKADMKKIEEEGANILIGTPGRLYDIMNRMDILDFKSLEILILDEADRLLDMGFQKQINSIIYLLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAESKSVNDPAASQQPTSSKTPAGLQIEYMECEAEKKPSQLVDILMKNRSKKMIIYFMTCACVDYWGLVLPRLSTLKGFSLIPLHGKMKQAAREKALASFTSLSTGILLCTDVAARGLDIPGVDCIVQYDPPQDPNVFIHRVGRTARLGKQGHAIVFLLPKEESYVEFLRVRRVPLQERSCSNDASDVVPEIRSAAKKDRDVMEKGLRAFVSYIRAYKEHHCSYIFRWKELEIGKLAVGYGLLQLPSMSELKQQSLSTEGFVPVEDINLEDIKYRDKSREKQRKQNLQAKKEAKEKETKPQKPNKTPKTAPVTRKKTAKQRRAQQSVEDEDELM | 560 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele27g0949 | 560 | SMART | helicmild6 | 290 | 375 | IPR001650 | - | |
Lele27g0949 | 560 | Pfam | DEAD/DEAH box helicase | 39 | 213 | IPR011545 | GO:0003676|GO:0005524 | |
Lele27g0949 | 560 | SMART | ultradead3 | 34 | 234 | IPR014001 | - | |
Lele27g0949 | 560 | MobiDBLite | consensus disorder prediction | 233 | 247 | - | - | |
Lele27g0949 | 560 | FunFam | RNA helicase | 9 | 227 | - | - | |
Lele27g0949 | 560 | Coils | Coil | 503 | 525 | - | - | |
Lele27g0949 | 560 | PANTHER | RNA HELICASE | 14 | 516 | - | - | |
Lele27g0949 | 560 | Pfam | Domain of unknown function (DUF4217) | 416 | 474 | IPR025313 | - | |
Lele27g0949 | 560 | MobiDBLite | consensus disorder prediction | 501 | 529 | - | - | |
Lele27g0949 | 560 | ProSiteProfiles | DEAD-box RNA helicase Q motif profile. | 15 | 43 | IPR014014 | GO:0003724 | |
Lele27g0949 | 560 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 90 | 395 | IPR027417 | - | |
Lele27g0949 | 560 | MobiDBLite | consensus disorder prediction | 228 | 247 | - | - | |
Lele27g0949 | 560 | CDD | SF2_C_DEAD | 251 | 384 | - | - | |
Lele27g0949 | 560 | CDD | DEADc_DDX55 | 26 | 224 | - | - | |
Lele27g0949 | 560 | Pfam | Helicase conserved C-terminal domain | 263 | 375 | IPR001650 | - | |
Lele27g0949 | 560 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 266 | 422 | IPR001650 | - | |
Lele27g0949 | 560 | ProSitePatterns | DEAD-box subfamily ATP-dependent helicases signature. | 170 | 178 | IPR000629 | - | |
Lele27g0949 | 560 | Gene3D | - | 252 | 489 | IPR027417 | - | |
Lele27g0949 | 560 | Gene3D | - | 4 | 227 | IPR027417 | - | |
Lele27g0949 | 560 | MobiDBLite | consensus disorder prediction | 501 | 560 | - | - | |
Lele27g0949 | 560 | SMART | DUF4217_3 | 413 | 476 | IPR025313 | - | |
Lele27g0949 | 560 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 46 | 224 | IPR014001 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele27g0949 | Lele-ChrLele27 | 17372644 | 17376284 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele27g0949 | 17 | 389 | Eukaryotic Initiation Factors Gene Family | AT1G72730 | 29.947 | 4.62e-47 | 168 |