Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0948 ATGGGAGGCAATTCGCCTTGTGCTTCATGCAAATTACTTCGACGCCGTTGTGCCAAAGATTGCATCTTTGCTCCTTATTTCCCTTCCGATGACCCTCAGAAGTTCGCCATCGTTCACAAGGTCTTCGGCGCTAGCAACGTCGGCAAAATGTTGCAGGAGCTTCCAGTTCAACAGAGAGCAGACGCAGTGAGCAGCTTAGTGTATGAAGCGAATGCAAGAGTTCGAGACCCAGTTTATGGTTGTGTTGGTGCCATATCGTATCTGCAGAATCAAGTTTCAGAGCTTCAAATGCAGCTCGCAGTGGCTCAAGCAGAGATCCTCTGCATCCAGATGCAGCAGGAGCCGGAGCCGGTAGTGGTGCAAAACCCGGAATTTGACCCGAATCAGAAACCTTATTTTCTCCAAAACGACCAGTACCTTAACTTTTCGTCTTCGAGCAATAATGTAATTCAGGACTCTCTTCAGAGAGAGAGCTTCTTCGGACACGACATGGTTTCTTAA 501 0.481 MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPQKFAIVHKVFGASNVGKMLQELPVQQRADAVSSLVYEANARVRDPVYGCVGAISYLQNQVSELQMQLAVAQAEILCIQMQQEPEPVVVQNPEFDPNQKPYFLQNDQYLNFSSSSNNVIQDSLQRESFFGHDMVS 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0948 166 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 124 - -
Lele27g0948 166 Coils Coil 85 105 - -
Lele27g0948 166 Pfam Lateral organ boundaries (LOB) domain 6 103 IPR004883 -
Lele27g0948 166 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0948 Lele-ChrLele27 17369533 17370134 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0948 3 115 AS2 family AT2G30130 92.035 7.23e-74 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele27g0948 LOB 1.7e-42 No_clan