Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele27g0947 | ATGGCTTTGTTTCAGATGCCTGAAACAAACGACGACGTAGCGGTGTACCTATTACTTCGGCCTTCTGCCTTCGTCTTCCAGCTTAACCCTTTACCTAGATTGCGTTTGGCCACACAGAGAGAGCTACCCAGTATCACCACTACCAAACCGCCTCTTGCTCCCTCCACAATCCCATCAAAAGCCTCAGAAACCCAAACCATGGCTCCCAACCTTGAATGTCGGATGTACGAGTCCAAGTATCCGGAAGTGGACATGGCCGTTATGATACAGGTCAAGAACATCGCCGACATGGGCGCATACGTCTCACTTCTTGAGTACAACAACATCGAAGGCATGATCTTGTTCTCCGAGCTCTCTCGCCGCCGGATTCGCAGCGTCAGCAGTCTCATCAAGGTCGGCCGCATCGAGCCCGTCATGGTTCTCAGGGTCGACAAGGAAAAGGGTTACATCGATTTGAGCAAGAGAAGGGTGTCTGAGGAGGATATCCAGGCTTGCGAGGAGAGGTACAACAAGAGCAAGCTTGTTCACTCCATCATGCGTCACGTCGCTGAGACTGAAAATATCGATTTAGAGGAGCTGTATGTTCACATCGGATGGCCTCTATATCGTAAATATGGTCATGCTTTTGAGGCATTCAAAATAATTGTTACGGATCCTGATTCAGTTTTGAATTCCCTCACCCGTGAGGTCAAGGAGGTTGGCCCTGATGGGCAGGAGGTGACCAAGGTGGTTCCAGCAGTATCAGAAGAGGTGAAGGAAGCTCTGGTAAAGAACATCAGAAGAAGAATGACCCCCCAGCCCTTGAAAATTAGGGCAGATATTGAAATGAAGTGCTTTCAGTTTGATGGAGTTCTTCACATTAAGGAAGCAATGCGGAAAGCTGAAGCTGCTGGAAATAATGATTGCCCAGTGAGGATTAAACTTGTTGCTCCTCCACTTTATGTTCTTACCACTCAGACTCTTGACAAGGAGCAAGGAATATTGGTACTCAAAGATGCTATTGAGGCTTGCACTAAAGCCATAGAGCAACACAAAGGCAAACTAGTTGTGAAGGAGCAACCCAGAGCAGTGAGTGAACGTGATGATAAATTGCTTGCTGAACACATGGCTAAGCTACGCCAAGATAACGAGGAGATCAGTGGTGATGAAGATAGTGAAGAGGAAGAAGATACAGGAATGGGAGAAGTTGATGTGGACCAGGGTGTTGGCATAACAGAGTGA | 1221 | 0.4767 | MALFQMPETNDDVAVYLLLRPSAFVFQLNPLPRLRLATQRELPSITTTKPPLAPSTIPSKASETQTMAPNLECRMYESKYPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSELSRRRIRSVSSLIKVGRIEPVMVLRVDKEKGYIDLSKRRVSEEDIQACEERYNKSKLVHSIMRHVAETENIDLEELYVHIGWPLYRKYGHAFEAFKIIVTDPDSVLNSLTREVKEVGPDGQEVTKVVPAVSEEVKEALVKNIRRRMTPQPLKIRADIEMKCFQFDGVLHIKEAMRKAEAAGNNDCPVRIKLVAPPLYVLTTQTLDKEQGILVLKDAIEACTKAIEQHKGKLVVKEQPRAVSERDDKLLAEHMAKLRQDNEEISGDEDSEEEEDTGMGEVDVDQGVGITE | 406 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele27g0947 | 406 | ProSiteProfiles | S1 domain profile. | 84 | 155 | IPR003029 | GO:0003676 | |
Lele27g0947 | 406 | Coils | Coil | 369 | 389 | - | - | |
Lele27g0947 | 406 | Pfam | S1 RNA binding domain | 81 | 155 | IPR003029 | GO:0003676 | |
Lele27g0947 | 406 | SUPERFAMILY | eIF2alpha middle domain-like | 157 | 262 | IPR024054 | - | |
Lele27g0947 | 406 | Gene3D | EIF_2_alpha | 268 | 390 | IPR024055 | - | |
Lele27g0947 | 406 | SUPERFAMILY | Nucleic acid-binding proteins | 74 | 155 | IPR012340 | - | |
Lele27g0947 | 406 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 1 | 67 | 396 | IPR011488 | GO:0003723|GO:0003743 | |
Lele27g0947 | 406 | Gene3D | Translation initiation factor 2; subunit 1; domain 2 | 158 | 261 | IPR024054 | - | |
Lele27g0947 | 406 | MobiDBLite | consensus disorder prediction | 379 | 395 | - | - | |
Lele27g0947 | 406 | CDD | S1_IF2_alpha | 81 | 156 | IPR044126 | GO:0003723 | |
Lele27g0947 | 406 | FunFam | Eukaryotic translation initiation factor 2 subunit alpha | 70 | 157 | - | - | |
Lele27g0947 | 406 | FunFam | Eukaryotic translation initiation factor 2 subunit 1 | 268 | 390 | - | - | |
Lele27g0947 | 406 | Gene3D | - | 69 | 157 | IPR012340 | - | |
Lele27g0947 | 406 | SMART | S1_6 | 82 | 155 | IPR022967 | - | |
Lele27g0947 | 406 | MobiDBLite | consensus disorder prediction | 371 | 406 | - | - | |
Lele27g0947 | 406 | Pfam | Eukaryotic translation initiation factor 2 alpha subunit | 193 | 323 | IPR011488 | GO:0003723|GO:0003743 | |
Lele27g0947 | 406 | SUPERFAMILY | eIF-2-alpha, C-terminal domain | 266 | 382 | IPR024055 | - | |
Lele27g0947 | 406 | FunFam | Eukaryotic translation initiation factor 2 subunit alpha | 158 | 262 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele27g0947 | Lele-ChrLele27 | 17358848 | 17363025 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele27g0947 | 68 | 406 | Eukaryotic Initiation Factors Gene Family | AT5G05470 | 82.059 | 0.0 | 538 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lele27g0947 | 27 | 17358848 | 17363025 | Lele28g1124 | 28 | 7282549 | 7286446 | ECH | |
Lele27g0947 | 27 | 17358848 | 17363025 | Lele27g0947 | 27 | 17358848 | 17363025 | ECH | |
Lele25g1132 | 25 | 7296743 | 7300274 | Lele27g0947 | 27 | 17358848 | 17363025 | hybridization | |
Lele26g1132 | 26 | 7289785 | 7296481 | Lele27g0947 | 27 | 17358848 | 17363025 | hybridization |