Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0944 ATGACAAGGAACTGGAATTTCAGTCGGTACAGGGATCATCGGGGACTTCTCCGCTTTTTGGTGGTGTGCTTGCTCCTTCAGAGCTTGTTGGGTCTTTGCTGCTCTTTAAATGACGAAGGCAAAGCGCTCTTGAAGTTGAGGCAGAGGATATTGAGTGACCCGTTTGGTGCTCTGTCAAATTGGATTGATGAAGGAGAAATTGACCCGTGCAATTGGTTCCGAGTTCAGTGCGTAGATGGAAGAGTGGTGGTCTTGAATTTGAAAGATCTTTGCCTTGGAGGAACTCTGGCACCTGAGCTTGCGAACCTTGTTCATATTAAGTCCATAATTCTGCGAAACAATTCTTTCTATGGGATCATCCCAGAAGAAATTGCTAAATTGAAAGAGTTGGAAGTTTTGGATTTGGGATACAACAACTTCAGTGGATCTCTACCAGCAGATCTTGGGAGTAATATCTCTCTATCCATCCTTTTGCTGGACAACAATGAGCTTCTTGGTGGGTTCTCTCCCGAAATTAATGCACTGAAGATACTTTCTGAAAGTCAAGTGGACGAAAACCAGCTAACTAATGCAGCTAAAATGCCATCTTGTGCAAGCAGATCCATTCCACAGAATGTTGGCCAAGACAGTGTGGCTCTGCGAAGACTACTGCAAACTAGAATTGGAAGTCCTTTAAATCGTGAAGCCGATCTCTCTCCTTCTGCCTCCGTCCCTGCTCCCTCGCCATCAACTTCCCCATCCCCTTCAGCAGCACCACCTATAACACCAAATAACACTTCTGCTGATAGAAATACTTCTGCATCTCCTTCACAAAAATTACCTGAAGCAAGATCCAAAAGTACCTCAAAAAAACATCATGTTGCAACTTTGGTTGGCGTTATAGGTGGTGGTGTATTTCTTATCTTAATCGCCAGCATATACATCTGTAGAACCAACAAAGTTGCTACTGTCAAACCTTGGGCAACAGGACTGAGTGGACAGCTTCAGAAGGCATTTGTAACAGGTGTGCCGAAGTTAAAAAGGTCCGAGCTCATAGCAGCATGTGAAGATTTTAGCAATGTAATTGGTACCTCACCAATTGGAACAGTGTACAAGGGGACTTTATCTAGCGGAGTTGAAATTGCCGTAGCATCAGTTACTTTGACGTCACTGAATGCTTGGTCAAAGACTTTAGAAGTAAAGTTTAGGAAAAAGATTGATATGTTATCAAAAGTGAATCACAAGAATTTTGTCAATCTACTTGGATATTGTGAGGAAGAGGAGCCTTTCACCAGAATGGTGGTTTTTGAATATGCACCCAATGGAACACTCTTTGAGCATTTACACATTAAAGAAGCTGAGCACTTGGATTGGATAACAAGACTTAGAATTGCAATGGGCATGGCATACTCCCTGCAATACATGCACCAGCTAGACCCTCCTGTAGCCCTTAGCAATATTAACTCTTCCTCCATCTTTCTCACCGAGGACTATGCCGCCAAAATTGCAGATTTGAGTTTCTCATATGAAACATCTGAGATGAAGACCAAGGGCAGTAAACACTTTGATAATCCATTAGCAAGTCCACAAAGCAACGTTTATGACTTCGGTGTTATACTATTCGAAATGGTAACATCCAGAGTCCCTTATTCAGTCAATAATAGCTCACTCGAAAACTGGGCATTGGATTATTTACAAAGAGACCGCTGTCCCTTGAGAGAAATGGTGGATCCAACTCTAGCCTCTTTCGACGAAGAGAAGCTAGAACAAGTTGCAGAATTGATCAAATCTTGTGTTGACCCTGATCCAAAGCAAAGACCAAGTATGAAAGATGTTAGTATGAGGCTGAGAGAAATAACAAACATAACACCTGAAGCAGCCGTACCAAGACTTTCTCCACTCTGGTGGGCAGAGCTTGAGATTTGTTCAGCAGATGGCAGCTAA 1923 0.4275 MTRNWNFSRYRDHRGLLRFLVVCLLLQSLLGLCCSLNDEGKALLKLRQRILSDPFGALSNWIDEGEIDPCNWFRVQCVDGRVVVLNLKDLCLGGTLAPELANLVHIKSIILRNNSFYGIIPEEIAKLKELEVLDLGYNNFSGSLPADLGSNISLSILLLDNNELLGGFSPEINALKILSESQVDENQLTNAAKMPSCASRSIPQNVGQDSVALRRLLQTRIGSPLNREADLSPSASVPAPSPSTSPSPSAAPPITPNNTSADRNTSASPSQKLPEARSKSTSKKHHVATLVGVIGGGVFLILIASIYICRTNKVATVKPWATGLSGQLQKAFVTGVPKLKRSELIAACEDFSNVIGTSPIGTVYKGTLSSGVEIAVASVTLTSLNAWSKTLEVKFRKKIDMLSKVNHKNFVNLLGYCEEEEPFTRMVVFEYAPNGTLFEHLHIKEAEHLDWITRLRIAMGMAYSLQYMHQLDPPVALSNINSSSIFLTEDYAAKIADLSFSYETSEMKTKGSKHFDNPLASPQSNVYDFGVILFEMVTSRVPYSVNNSSLENWALDYLQRDRCPLREMVDPTLASFDEEKLEQVAELIKSCVDPDPKQRPSMKDVSMRLREITNITPEAAVPRLSPLWWAELEICSADGS 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0944 640 Gene3D Phosphorylase Kinase; domain 1 321 431 - -
Lele27g0944 640 MobiDBLite consensus disorder prediction 254 276 - -
Lele27g0944 640 SUPERFAMILY Protein kinase-like (PK-like) 333 609 IPR011009 -
Lele27g0944 640 MobiDBLite consensus disorder prediction 224 282 - -
Lele27g0944 640 PANTHER PROTEIN MALE DISCOVERER 2 18 637 - -
Lele27g0944 640 Pfam Protein tyrosine and serine/threonine kinase 352 608 IPR001245 GO:0004672|GO:0006468
Lele27g0944 640 ProSiteProfiles Protein kinase domain profile. 349 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g0944 640 Pfam Leucine rich repeat N-terminal domain 37 77 IPR013210 -
Lele27g0944 640 Gene3D Ribonuclease Inhibitor 35 218 IPR032675 -
Lele27g0944 640 MobiDBLite consensus disorder prediction 239 253 - -
Lele27g0944 640 FunFam Nuclear pore complex protein NUP107 36 194 - -
Lele27g0944 640 FunFam Inactive receptor-like serine/threonine-protein kinase 323 431 - -
Lele27g0944 640 SUPERFAMILY L domain-like 38 191 - -
Lele27g0944 640 Gene3D Transferase(Phosphotransferase) domain 1 432 620 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0944 Lele-ChrLele27 17344169 17347520 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0944 14 605 Receptor kinase-like Gene Family AT5G16000 27.302 1.05e-52 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Lele27g0944 PK_Tyr_Ser-Thr 2.5e-24 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1135 25 7312568 7315915 Lele27g0944 27 17344169 17347520 CCT
Lele25g1135 25 7312568 7315915 Lele27g0944 27 17344169 17347520 hybridization
Lele26g1136 26 7311741 7315136 Lele27g0944 27 17344169 17347520 hybridization