Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0938 ATGGGTGACCCTTCATCCCCTCCGTCTCAGTCCCCTGAAGCCGCCGCCACCACGCCCACTCATCCTTCTCCTCGCAAAACCAAAGGCAAAGGTGGTCCCGACAACAACAAGTTTAGGTTTCGCGGAGTGAGGCAGCGAAGCTGGGGCAAATGGGTTGCCGAGATCCGTGAGCCCCGCAAGCGTACCCGCAAGTGGCTAGGCACTTTTGCCACCGCCGAAGACGCCGCCCGTGCCTACGACCGCGCCGCTCTCATCCTTTACGGCTCTAGGGCTCAGCTCAACCTTCAGCCTTCTCTATCTTCCTCTTCCTCCTCAGCTTCCTCCTCCTCCTCTTCTCGCCCCTCCAATTCTTCTTCCGCTCAAACCCTCCGCCCCTTGCTCCCCCGTCCCCCCGCCGCTTCCGCCTTCTTCCCCTACGGCCTTTATAATACTCAGTTTCTCAGCCCAGTCAACAACGCCCTACAAGTGCAACATCACCAGCAGAAAGTGGTGCAACTATATGGGTCCCCGAAATCTGATGTTGGAAATAATACTAATCTCGATGACTCCACTACAGCAGCAACCTCGTACCAGAACCATAGCCATGATCTGCATGCGTCAAATCAGGAGCTGCACAGTCATAGTCATAGTCAGAGTGATTGCATGTACGATGATATCAGCTCCTTGGTAGGATCAGGTTTGAGTTCTTCTCAGAGTGTTATAACGCCGCAGTGTGGGGCAGCTCTGGATCTGCCGGCGGTAGCTGCGGGAGCAGTCAGCGTGGGATCGCCGTCTATGTGGCCGATGACAAATGAGGAAGAGTTCCCCTCTTGTCTTTGGGACTATAATGATCCTTTCTTCTTTGATTTTTGA 852 0.5469 MGDPSSPPSQSPEAAATTPTHPSPRKTKGKGGPDNNKFRFRGVRQRSWGKWVAEIREPRKRTRKWLGTFATAEDAARAYDRAALILYGSRAQLNLQPSLSSSSSSASSSSSSRPSNSSSAQTLRPLLPRPPAASAFFPYGLYNTQFLSPVNNALQVQHHQQKVVQLYGSPKSDVGNNTNLDDSTTAATSYQNHSHDLHASNQELHSHSHSQSDCMYDDISSLVGSGLSSSQSVITPQCGAALDLPAVAAGAVSVGSPSMWPMTNEEEFPSCLWDYNDPFFFDF 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0938 283 MobiDBLite consensus disorder prediction 96 124 - -
Lele27g0938 283 SMART rav1_2 39 102 IPR001471 GO:0003700|GO:0006355
Lele27g0938 283 Gene3D AP2/ERF domain 38 96 IPR036955 GO:0003700|GO:0006355
Lele27g0938 283 MobiDBLite consensus disorder prediction 168 192 - -
Lele27g0938 283 CDD AP2 39 96 IPR001471 GO:0003700|GO:0006355
Lele27g0938 283 ProSiteProfiles AP2/ERF domain profile. 39 96 IPR001471 GO:0003700|GO:0006355
Lele27g0938 283 FunFam Ethylene-responsive transcription factor 2 39 97 - -
Lele27g0938 283 Pfam AP2 domain 39 88 IPR001471 GO:0003700|GO:0006355
Lele27g0938 283 MobiDBLite consensus disorder prediction 1 24 - -
Lele27g0938 283 SUPERFAMILY DNA-binding domain 40 97 IPR016177 GO:0003677
Lele27g0938 283 MobiDBLite consensus disorder prediction 96 125 - -
Lele27g0938 283 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 21 214 - -
Lele27g0938 283 PRINTS Ethylene responsive element binding protein signature 40 51 IPR001471 GO:0003700|GO:0006355
Lele27g0938 283 PRINTS Ethylene responsive element binding protein signature 62 78 IPR001471 GO:0003700|GO:0006355
Lele27g0938 283 MobiDBLite consensus disorder prediction 1 41 - -
Lele27g0938 283 MobiDBLite consensus disorder prediction 27 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0938 Lele-ChrLele27 17306311 17307162 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0938 25 283 AP2-EREBP Transcription Factor Family AT2G40220 45.515 3.44e-49 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele27g0938 AP2 9.4e-13 CL0081