Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0935 ATGGAAAATTTCTACTATTCTAGTTCTTCTGCTGGTTCTGGTTCTAGTAGCTGCTGCTGGTGGCCCTTGCAGGGCACAACAAACAGTAATCATCGTCTTTCTCCTTTTTCAGTGCAGACTCCATTGTTGCCTCCTCATCACATCTCAGATTCTTCATGTTCTCTTCAGTTCTGTGAGTTCCCTCAGTCATGGCCTGCTGAAGATAAAGCTTCCACTGCCTCCAAAAGCCATAGCCAAGCTGAGAAACGCCGTAGAGACAGAATCAATGCTCAGCTCGCCACTCTCAGAAAACTCATCCCCAAGTCTGATAAGATGGACAAGGCAGCATTACTGGGGAGTGTGATAGAGCAAGTGAAGGATCTGAAACGAAAAGCCATGGATATAGGAACATCCTTCACAGTTCCTACAGAGATCGATGAAGTATCAATAGACCAAGAAGAAGACGAAGAAAGCTCAATAAGCTCCATCATCAACAACAAAGTGAAAGGAAACAACAACAAGAAGAAGATAGTGCTCAGAGCTTCAGTTTGCTGTGAGGATCGACCAGAACTGTTCTCAGAACTCATAAATGTTCTGAAAGGGCTGAGTTTAACAGCAGTGAAAACTGACATGGCGAGTGTGGGAGGAAGAATTAAAAGCATATTGGTTCTGTGTTCTAAGGACAGTGACGATACTGTTTGTGTCGCTACTCTGAAACAGTCTCTTAAATCTGCTGTCACTAAAATTGCTGCTTCTTCGTCTTCATCAATTGCTTCTTCTTGTCCTGCAAGAAGTAAGAGGCAGAGGTTCTTCTTGCCTTCTTCGCCTTGCCTCCATTAA 819 0.4383 MENFYYSSSSAGSGSSSCCWWPLQGTTNSNHRLSPFSVQTPLLPPHHISDSSCSLQFCEFPQSWPAEDKASTASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGSVIEQVKDLKRKAMDIGTSFTVPTEIDEVSIDQEEDEESSISSIINNKVKGNNNKKKIVLRASVCCEDRPELFSELINVLKGLSLTAVKTDMASVGGRIKSILVLCSKDSDDTVCVATLKQSLKSAVTKIAASSSSSIASSCPARSKRQRFFLPSSPCLH 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0935 272 MobiDBLite consensus disorder prediction 68 87 - -
Lele27g0935 272 Pfam Helix-loop-helix DNA-binding domain 75 121 IPR011598 GO:0046983
Lele27g0935 272 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 72 121 IPR011598 GO:0046983
Lele27g0935 272 Gene3D - 66 128 IPR036638 GO:0046983
Lele27g0935 272 PANTHER TRANSCRIPTION FACTOR BHLH30 62 265 IPR045847 GO:0003700|GO:0006355
Lele27g0935 272 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 73 124 IPR036638 GO:0046983
Lele27g0935 272 CDD bHLH_AtAIG1_like 67 144 - -
Lele27g0935 272 SMART finulus 78 127 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0935 Lele-ChrLele27 17286012 17287038 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0935 1 267 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G40200 41.155 1.00e-48 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele27g0935 HLH 2.4e-10 No_clan