Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0930 ATGTTTGCTAAATTATTTCACAAACATACACAAGAACAACGTCCTCAGCATAATGTGGGACAAGGAAGTTTTACATCAGCAGATTTGGATCCCAAAGTTGTTCTTCACTATGGTGTTCCATCAACTGCATCTATCCTGGCTTTTGATCACACTCAACGTCTGTTGGCAATAGGAACTCTAGATGGTCGGATAAAGGTAATTGGTGGTGACAACATTGAAGGGATCCTTTTCTCCCCAAAGCATTCGTCATTAAAAAATTTAGAGTTCTTCCAAAATCAAGGTTTTCTTGTCAGTGTCTCAAATGATAATGGAATACAGGTTTGGGATTTGGAAAGCAGGCACATGGCTTCTTCTTTACAGTGGGAATCTACTATAACTGCCTTCTCTGTTATCTATGGCACTAGTTACATGTATATCGGAAGCGAGCATGGAATGGTATATGTTTTGAAGTTTGACACTGAAGACAGAAAACTTTTGATCTTGCCTTACTATGTTCCCATCAATGTAATTGCTGAAGCAGCTGGGATGTCACTTGATTGTGTTTCGGTGGTCAGAGTTCTTCATCAACCTTCTTCTGAGGGAAACAGACTGCTGATTGCATATGAGAATGGCGTGCTTGTACTATGGGATGCTTCTGAAGATAAAGTTGTTCTCATCAGAGGACATAGGGACCTTGAATTAAAGGATAAACAAATGGTTACTCATCTAAATAACACTGAGGATATTCTGTCTGATAATAAATTAGGCCATAAAGAAGACAAGGAGATAAGCTCTGTCTGTTGGGCATCTAATAATGGATCAGTTATTGCTGTTGGTTACATAGATGGTGATATAATGTTCTGGGACTTGTCAGCTGCTGACTCTTCCATTGGTCATCAAGCTAAAAATATGTCAAATCATGTTGTCAAGCTTCAATTATCATCATCAGATAGAAGACTACCTGTCATTTTTCTACATTGGTGTGCAAATAGATCAAACAATAATACTGGGGGCCTTCTATTTGTTTATGGTGGTGATGAAATTGGGTCTCAAGAAGTTCTGACAGTTTTGAGTGTTGATTGGTCCTCTGGGATTGAAAGTCTCAAATGCATTGGCCGTATTGATGTTACACTTAATCGTTCTTTTGCTGATATGGTTTTATTAGCAACTGATTCTTCTTCAGACAGAGGTTGTAATATGCTATATGTATTGACAAATCCTGGACAGCTGCATCTTTATGACACTGCTTGCTTGTGTTCCTTAATGTCTCAACATGAAAAAAATGCATCTGTTCCTTCAATTGAATATCCCATGGTCATACCCACTCTTGAACCGTACATGACAACAGCAAAGCTTGGTGTGGTACATGGAGATGGGAAGTTATATCAGGCCTTCTCTGAGATCTTATTAGCTGCTAAGCAGAGTGCAGCAAAAGATCAGACAAGTAGTGGTATCAAGTGGCCTTTGACTGGTGGAGTTCCAGGTCAGCTTTTGAAAGAAGACCTTCATGTCCTTCAAATGTACATAGCAGGTTACCAAGATGGATCTATACGGATATGGGATGTCACACATCCTTCTTTGACATTAGTGTACAATATGACATCTGAGGTGAATGGTATCGAAATTGATAGTGCAAGTGCACCAGTATCAGCGTTGGACTTTTGTCCTGATACTCTATGGTTGGCAGTTGGCAATAAATGTGGTCTGGTTCGTCTATATGGGCTAGTTGGGAGTTCAGATGAAACGAACGTGTACTTTGTGGCAGAAAATGAAAGCAAAGTTCAAAAGATCCCTAAAGGGAATGGACCTCATTGTACAGCAGTATTTTCCCTGCAAAGTTCTCCTGTATGCAGCCTAAAGTTTGCAAACCTGGGAAGAAAGCTTGCTGTTGGATATGAATGTGGAAGGGTTGCTATGCTTGATATCGTAGAACCATCAGTTCTCTTTCTCACCAATGAGGAATCTAGTGTATCTTCGCCAATAATTTCTCTGAATGTAAAATTTTCAGATAGTTGTAGCTTACCAAACAGTCCAGAGAAATCTGCAACCAATATTTCTGACAGTCCTGGCAAAGGGCTGTTAATTAATGCAACAAGAGATGCACATGTTGTTGCCACAGATACTGCATCAGGGGGCATGGTTTGCAATGTGCCAATAAACCCAAAGAAAGAATCAAATTTAATCTCCATGCATGTTATAGATGGTACTTGTGAACCATCAAGTGGAAAAGATTCATCCAACTCACCTCTGAATGCTGATTCTGGATCTGAACTTGGACAAGCTAACGTTCAGTCTGAAAATTCACCTGTTGAAGCTGAAGCTGTCACAACTGGAGAAAGTTCATATTTTGCTCATATGTTGTTCAACTCACTCATTTTGCTTTGTTGTGAGAGTCAATTGAGCATACACTCTTTGAAATCCATGATTGAGGGTAGCAGTAAGTACATTCGGAGGGTGAACCTGGTAAACCGATGTTGTTGGACAACTACATTAATGAAAGATGGGAAAGAGTGTGGGTTGGTTGTACTGTATCAAACTGGAGACATTGAATTAAGGTCCTTACCAACTCTGGAAGTGGTGGGGGAGTGCTCTTTAACGGCAATTCTAAGATGGAGCTTGAAGACCAACATGGAGAAGACAATATGTTCTTCCTCTAATGGACAACTTATTCTGGTCAACGAGAATGAAACTGCTTTTATATCACTGTTGAAATGTGAAAATGAACTCTGGATTCCTGAGTTATTGCCTTGTCTACATGATAGAGTCCTTGCAGCTGCTGGCGATGCCACATCAAGCTTACCTTCAAACCAGAATGAAGAACAGGGGCGACAACTACCAGGTATCTTGGGTAATGTTGTTAAGAACTTTAAGGCGGGTAAAGTGGAGGAGGCAAATCAAGCAATTCATCATTATAGTTCTGCAAATTTAGAAAAACTTTTCTCTTGTCCCCCCTTCTTAAAGGCTTCCTCAGCCACAGCTGATAAGCAAGATCCATTTGAGTTTAACATAGATGAAATTCACATTGACGAACCTTCAGTTGTTAACTATACTCAGAAAACTGATAGTGACAAGACAGATAGAGGAAAAGGAACAGACAACAAAGGAAAAGGAGCAGACAAACAAAAATTATTTGAGGGTGCAAGCACTGATACAAAACCGAGACAGAGAACAGCAGAAGAAATCAAGGCCAAATATAGACAGGGGGGGACCGGGGATGCCTCTGCAGCTGCTGCACTTGCAAAGGAGAAGCTTCATGAACGCGGAGAAAAACTTCAGATGCTCAGCCAACATACTGAAGAACTGCAAAGTGGGGCGGAAGACTTTGCATCAATGGCAAAAGAACTTGCCAAAAGAATGGAAAACCGTAAATGGTGGCAGATATGA 3363 0.4038 MFAKLFHKHTQEQRPQHNVGQGSFTSADLDPKVVLHYGVPSTASILAFDHTQRLLAIGTLDGRIKVIGGDNIEGILFSPKHSSLKNLEFFQNQGFLVSVSNDNGIQVWDLESRHMASSLQWESTITAFSVIYGTSYMYIGSEHGMVYVLKFDTEDRKLLILPYYVPINVIAEAAGMSLDCVSVVRVLHQPSSEGNRLLIAYENGVLVLWDASEDKVVLIRGHRDLELKDKQMVTHLNNTEDILSDNKLGHKEDKEISSVCWASNNGSVIAVGYIDGDIMFWDLSAADSSIGHQAKNMSNHVVKLQLSSSDRRLPVIFLHWCANRSNNNTGGLLFVYGGDEIGSQEVLTVLSVDWSSGIESLKCIGRIDVTLNRSFADMVLLATDSSSDRGCNMLYVLTNPGQLHLYDTACLCSLMSQHEKNASVPSIEYPMVIPTLEPYMTTAKLGVVHGDGKLYQAFSEILLAAKQSAAKDQTSSGIKWPLTGGVPGQLLKEDLHVLQMYIAGYQDGSIRIWDVTHPSLTLVYNMTSEVNGIEIDSASAPVSALDFCPDTLWLAVGNKCGLVRLYGLVGSSDETNVYFVAENESKVQKIPKGNGPHCTAVFSLQSSPVCSLKFANLGRKLAVGYECGRVAMLDIVEPSVLFLTNEESSVSSPIISLNVKFSDSCSLPNSPEKSATNISDSPGKGLLINATRDAHVVATDTASGGMVCNVPINPKKESNLISMHVIDGTCEPSSGKDSSNSPLNADSGSELGQANVQSENSPVEAEAVTTGESSYFAHMLFNSLILLCCESQLSIHSLKSMIEGSSKYIRRVNLVNRCCWTTTLMKDGKECGLVVLYQTGDIELRSLPTLEVVGECSLTAILRWSLKTNMEKTICSSSNGQLILVNENETAFISLLKCENELWIPELLPCLHDRVLAAAGDATSSLPSNQNEEQGRQLPGILGNVVKNFKAGKVEEANQAIHHYSSANLEKLFSCPPFLKASSATADKQDPFEFNIDEIHIDEPSVVNYTQKTDSDKTDRGKGTDNKGKGADKQKLFEGASTDTKPRQRTAEEIKAKYRQGGTGDASAAAALAKEKLHERGEKLQMLSQHTEELQSGAEDFASMAKELAKRMENRKWWQI 1120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0930 1120 PANTHER LETHAL 2 GIANT LARVAE PROTEIN 8 1113 - -
Lele27g0930 1120 SMART WD40_4 239 282 IPR001680 GO:0005515
Lele27g0930 1120 SMART WD40_4 28 68 IPR001680 GO:0005515
Lele27g0930 1120 SMART WD40_4 595 634 IPR001680 GO:0005515
Lele27g0930 1120 SMART WD40_4 528 567 IPR001680 GO:0005515
Lele27g0930 1120 SMART WD40_4 69 109 IPR001680 GO:0005515
Lele27g0930 1120 MobiDBLite consensus disorder prediction 731 764 - -
Lele27g0930 1120 MobiDBLite consensus disorder prediction 1013 1048 - -
Lele27g0930 1120 Gene3D - 21 180 IPR015943 GO:0005515
Lele27g0930 1120 Pfam Synaptobrevin 1075 1117 IPR042855 -
Lele27g0930 1120 Pfam WD domain, G-beta repeat 249 282 IPR001680 GO:0005515
Lele27g0930 1120 Gene3D - 494 889 IPR015943 GO:0005515
Lele27g0930 1120 ProSiteProfiles v-SNARE coiled-coil homology domain profile. 1055 1119 IPR042855 -
Lele27g0930 1120 CDD R-SNARE_STXBP5_6 1055 1113 - -
Lele27g0930 1120 SUPERFAMILY WD40 repeat-like 43 641 IPR036322 GO:0005515
Lele27g0930 1120 SUPERFAMILY SNARE fusion complex 1069 1112 - -
Lele27g0930 1120 Gene3D - 181 430 IPR015943 GO:0005515
Lele27g0930 1120 Gene3D - 1051 1112 - -
Lele27g0930 1120 ProSitePatterns Trp-Asp (WD) repeats signature. 96 110 IPR019775 -
Lele27g0930 1120 MobiDBLite consensus disorder prediction 732 764 - -
Lele27g0930 1120 MobiDBLite consensus disorder prediction 1005 1048 - -
Lele27g0930 1120 SUPERFAMILY WD40 repeat-like 499 904 IPR036322 GO:0005515
Lele27g0930 1120 ProSiteProfiles Trp-Asp (WD) repeats profile. 77 118 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0930 Lele-ChrLele27 17240301 17251255 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele27g0930 27 17240301 17251255 Lele25g1164 25 7577944 7579902 CCT
Lele27g0930 27 17240301 17251255 Lele26g1163 26 7550633 7553020 CCT
Lele27g0930 27 17240301 17251255 Lele27g0915 27 17100284 17102303 CCT
Lele27g0930 27 17240301 17251255 Lele28g1155 28 7527764 7528328 CCT
Lele25g1150 25 7417077 7428474 Lele27g0930 27 17240301 17251255 hybridization
Lele26g1150 26 7400758 7412111 Lele27g0930 27 17240301 17251255 hybridization