Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0927 ATGCCTTCGCCGGTCGGAGTAGCCAATCATTGCTTAATGCCGGATGCAGCTCGCGCTCTCGAAGAAGCCGTCTCCGTCGCGCGCCGTCTTAGGCACCCCCAGACCACCTCGCTTCATGCTGTCTCCGCCTTGCTTTCGTTGCCGTCGTCCACCTTACGTGACGCCTGTGCTCGTGCCCGGAACTGTGCCTACTCGCTTCGGCTTCAATTCAAGGCGCTAGAGCTGTGCTTGAGTGTATCTCTTGACCGGGTCCCATCGACTCAACTCGCCGACGACCCGCCAGTATCTAACTCGCTCATGGCCGCCATCAAGCGCTCCCAGGCGATTGAGCTTCAACAGTTGATATTATCGATTCTCTACGACCCGGTCGTGAGCCCGGTATTCGAGAGGCGGGTTTTCGAAGCTCCGAAATTAAACTTGCTATTCTTCGTCCTCTCCCACATCATCTGCAATTTGACGGAGCATCCGGACCCGGGTCGTCGGAGCTTCAGTTTCCCGTTTCCTGGGTCTTTTGGAACCAGCGACGGCGGCGCTGAGAATTACAAAAGAATCGGAGATGTGCTTTGCAGGAGCAGAGGGAGGAATCCCCTGCTTTTGGGTGTATGCGCAGATGATGCTCTGTGTAGTTTCACAGAAGATGTTAATAAACAAAGAGACGGTACTTTGCCAGTCGAGTTGTCTGGATTACGCGTGATATGCATAGGAAAAGATATTTCCAAGTTTGTCTTTGATAATTGTGATAACGAGACTTTCAGTTCAAAGCTCAAGGAGATTGCTCAAATGGTAGAGCAGGGAGTAGGACCTGGTTTGGTGGTGAATTTTGGGGACTTGAAGTCTTTGATTGATGAGAATGCCTCAAATGAAGCAGGGAATTATATTGTTGCTGAATTGGCGAAGTTGTTGGAGCTTAATTATGGCAAGTTTTGGTTGATGGGAGCTGCGGCGAGCTATGAGTGCTATCTGAAATTTATGGGAAGGTTTCCATCCATTGAGAAGGATTGGGACTTGGAGCTTCTGCCCATCACGTCTGTTCGGCCTCAGGATGAATCATATCAGAGGCCTAGGTACAGCTTAATGGATTCATTTGTCCCATTTGGTGGCTTGTTTTCTTCACCTTCTGATTTGAAAGTTGGCTCATATTATTGTGTTCCCCGTTGCCTTCGTTGTGGTGAAAGTTGTGTGCAAGAGGTGCTTCCAGCTTCAAATGAGAGGCTGTCTGCTTCGTCTGCTGATCCTTACCAATCTAATTTACCTCCATGGTTGCGGACCGCTGACCTTGGCATAACAAAAGAGCCGAACGATAAGGTGTTGCAGAGAAAAGAAGACAGTGTTCTGCTGGATACTAGTGAATCTGGGCCTATCGAGAAATTGGATGAGACATGCCAGCATCTGCATAATACTCAGCAATTCTCTGAAGCAATTCCTTGTCAAACTGTCATGAGTTCCCAATGCTCTGATGGTAAAAAGGCAGATACTGACAATGACAGCAACAAAATTTCAGATGCATCACCTAGTGTGCACATCGATCTCAATTCTACTGCGCCCATTGCAGAAGAGATGGTTTCTACATCACATTCAAGTATTCCTGCTCCTATGATTTCCGAAGCAAATCAGGAGAAACATGTATCTAAAGCCTTAGAGATATTCCAGAAAGCAAAAGATCTTGAGTCAGGTGACCTAAGATCATGCAACATGTCCAATTCAAGCATGTGCAATGGTAGCCAATTGTCTCCCTCATCTGTGACTTCTGTAACCACAGATCCACGTATAGGAACTTGCTTTTCTCCTACAAGCAACAAATCTAAGAAACCAACTATGGGGGGTCCAAAGGAAATTGCGAGTCCCCTCGCTTCAAACTATAATTTAATTAACAGGGATGTCTTTAAGCATCCAGCCCAGTCTTCATCCTGCTTAAGTTCTGACCATTCTGGACAATATGATCTAAGAAATCCTAAAATTCTTTTTGGAGCTCTTGCCAAAAAGGTTACCTGGCAGGATGAAGCCTTACAAAGCATTGTAAAAACAATATCTTACTGCGAAACAAGCAGGGGCAAATGCCTACGAGGGGGCATATGGATGAATTTTGTAGGAACTGATAGGATTGGTAAGAAGAAAATTGCTGTTTCTCTGACTGAGATTTTGTATGGAAGCCAGGAAAGCTTCATTTTTGTGGATCTAAATCATGAGGAAATAAATGGACGTGATGTGAAATTTAGAGGAAAGACTATTCTTGATGTTTTAGTTGCTGAGTTGTGCAAAAATCCGTTGTCTTTGGTTTTCCTTGACAATGTAGACATGGCTGATATGCTCGTTCAGAATAGTTTATCTCAAGCTATCAAGACTGGAAAAATTATAGACTCGTGTGGAAGAGAAGTTGGTGTAAACAATGCAATAATTGTGACATCTTTCTCAGTTCAAGAAGATAATTGGAATTGCACCCCAAAGACAGAATTCTCCGGCTATTCTGAGGATAGCGTATCATGGACAAAAGGGGTAACTATCATGATAAAAGTTGAACATGTAATTGGAGACATCGGAAGTCCAAGCGTTGCTGTACTTAAATGTTCAACAGAGGGCGTTCCCGATCCAATCCTTGTAAATAAAAGAAAGCTGAGTTCTGACAATGCCCTTAATGATCAGCACAAAACCTTAGAAACGGCTAAAAGGGCTCACAAAATTTCAAATTGTTTTCTGGATTTGAATGTCCCTGCAGAAGAGAACGAACTGCAATTCATGGATGATGGAAACCCTGAAGATGTCTCAACTACAACACAAAACCCCTGGTTGCAAGAATTGTATAATCAGGTTGATGAAACAATCATCTTGGAACCATACAATTTTGATGCACTTGCAGATAGAGTGTTGAAAATTATCAGAAGCATCTTCCAAAAGATTCTCGGATCCGAGTGCTCACTACAGATAGAGTCAGAAGTCATGGAACAGTTATTTGCAGCTGCATATGTCTCAGAAGGGGACGTGGCAGTGGAGGATTGGGTGGAGCAAGTTCTTAGTGGAGGATTTACAGAGATACAGAGAAGGTTAAGATTGTATGATATGCAATCTGCAGCTAATGCTCGTGTGATTACCCTTGCATATTAG 3099 0.4424 MPSPVGVANHCLMPDAARALEEAVSVARRLRHPQTTSLHAVSALLSLPSSTLRDACARARNCAYSLRLQFKALELCLSVSLDRVPSTQLADDPPVSNSLMAAIKRSQAIELQQLILSILYDPVVSPVFERRVFEAPKLNLLFFVLSHIICNLTEHPDPGRRSFSFPFPGSFGTSDGGAENYKRIGDVLCRSRGRNPLLLGVCADDALCSFTEDVNKQRDGTLPVELSGLRVICIGKDISKFVFDNCDNETFSSKLKEIAQMVEQGVGPGLVVNFGDLKSLIDENASNEAGNYIVAELAKLLELNYGKFWLMGAAASYECYLKFMGRFPSIEKDWDLELLPITSVRPQDESYQRPRYSLMDSFVPFGGLFSSPSDLKVGSYYCVPRCLRCGESCVQEVLPASNERLSASSADPYQSNLPPWLRTADLGITKEPNDKVLQRKEDSVLLDTSESGPIEKLDETCQHLHNTQQFSEAIPCQTVMSSQCSDGKKADTDNDSNKISDASPSVHIDLNSTAPIAEEMVSTSHSSIPAPMISEANQEKHVSKALEIFQKAKDLESGDLRSCNMSNSSMCNGSQLSPSSVTSVTTDPRIGTCFSPTSNKSKKPTMGGPKEIASPLASNYNLINRDVFKHPAQSSSCLSSDHSGQYDLRNPKILFGALAKKVTWQDEALQSIVKTISYCETSRGKCLRGGIWMNFVGTDRIGKKKIAVSLTEILYGSQESFIFVDLNHEEINGRDVKFRGKTILDVLVAELCKNPLSLVFLDNVDMADMLVQNSLSQAIKTGKIIDSCGREVGVNNAIIVTSFSVQEDNWNCTPKTEFSGYSEDSVSWTKGVTIMIKVEHVIGDIGSPSVAVLKCSTEGVPDPILVNKRKLSSDNALNDQHKTLETAKRAHKISNCFLDLNVPAEENELQFMDDGNPEDVSTTTQNPWLQELYNQVDETIILEPYNFDALADRVLKIIRSIFQKILGSECSLQIESEVMEQLFAAAYVSEGDVAVEDWVEQVLSGGFTEIQRRLRLYDMQSAANARVITLAY 1032
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0927 1032 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 656 805 IPR027417 -
Lele27g0927 1032 MobiDBLite consensus disorder prediction 569 604 - -
Lele27g0927 1032 ProSiteProfiles Clp repeat (R) domain profile. 8 109 IPR004176 -
Lele27g0927 1032 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 8 1009 - -
Lele27g0927 1032 MobiDBLite consensus disorder prediction 569 608 - -
Lele27g0927 1032 Gene3D - 629 830 IPR027417 -
Lele27g0927 1032 MobiDBLite consensus disorder prediction 483 506 - -
Lele27g0927 1032 Gene3D - 12 139 IPR036628 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0927 Lele-ChrLele27 17204610 17210856 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1154 25 7459199 7465760 Lele27g0927 27 17204610 17210856 CCT
Lele25g1142 25 7369286 7369816 Lele27g0927 27 17204610 17210856 CCT
Lele27g0927 27 17204610 17210856 Lele25g1170 25 7632686 7636571 CCT
Lele27g0927 27 17204610 17210856 Lele26g1169 26 7602383 7606402 CCT
Lele27g0927 27 17204610 17210856 Lele27g0909 27 17046302 17052013 CCT
Lele27g0927 27 17204610 17210856 Lele28g1162 28 7585376 7589397 CCT
Lele27g0927 27 17204610 17210856 Lele28g1146 28 7438307 7444097 ECH
Lele25g1154 25 7459199 7465760 Lele27g0927 27 17204610 17210856 ECH
Lele26g1153 26 7446381 7451113 Lele27g0927 27 17204610 17210856 ECH
Lele27g0927 27 17204610 17210856 Lele25g1154 25 7459199 7465760 ECH
Lele27g0927 27 17204610 17210856 Lele26g1153 26 7446381 7451113 ECH
Lele27g0927 27 17204610 17210856 Lele27g0927 27 17204610 17210856 ECH
Lele28g1146 28 7438307 7444097 Lele27g0927 27 17204610 17210856 ECH
Lele01g1219 01 7353530 7358347 Lele27g0927 27 17204610 17210856 ECH
Lele02g1489 02 19089372 19094181 Lele27g0927 27 17204610 17210856 ECH
Lele03g1232 03 7316094 7320925 Lele27g0927 27 17204610 17210856 ECH
Lele04g1474 04 19938523 19943327 Lele27g0927 27 17204610 17210856 ECH
Lele27g0927 27 17204610 17210856 Lele01g1219 01 7353530 7358347 ECH
Lele27g0927 27 17204610 17210856 Lele02g1489 02 19089372 19094181 ECH
Lele27g0927 27 17204610 17210856 Lele03g1232 03 7316094 7320925 ECH
Lele27g0927 27 17204610 17210856 Lele04g1474 04 19938523 19943327 ECH
Lele25g1154 25 7459199 7465760 Lele27g0927 27 17204610 17210856 hybridization
Lele26g1153 26 7446381 7451113 Lele27g0927 27 17204610 17210856 hybridization