Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0922 ATGGGAACCTACCATTACAAAATATTCAATTGCTTCAACCTTAAGTTCACTGTCTCGGAGCCGGGCCCACCCGAGGACGTCAAGTACGTCTTTTACAAGTTCTCCTCCGGCGCCGATCACTTGTCCGCCGATCAACTAGGCCTGTTCCTGGTGAAGCACCAAGGCGAATCGGATTTGACCTCTTCAAATCCCGCCCAAATAGTTGAGAAGATCTTGCAATCGCGGGATCAGAATGAAGAGATTGAAGCTACGGAGGCCACCAGCTCCGTTGAGGGTATCAGTCTCGACGAATTCTTCCATTTTCTACTCCTCGATGATTTCAATGCCCCCTTAAAATCCCAAGTGCATCATGATATGAATGCTCCGCTGTCACATTATTTCATATATACAGGACACAATTCTTATCTGACTGGGAATCAACTGAGCAGTGATTGTAGTGATGTTCCAATTATAAAGGCTTTGCTTGAAGGTGTGCGAGTAATTGAACTAGATTTATGGCCAAATTCAACTCGAGATGATGTTATTGTAGTTCATGGAAGGACTCTCACCTCTCCTGTTGCACTCATTCAATGTTTGAAGTCGATAAAAGAATATGCATTTGTTAAATCTCATTACCCAGTCATTATAACTTTAGAAGATCACCTCCCAACAGATCTTCAAGCTAAAGTTGCAGAGATGGTAACACAAACATTTGGAGAAGCCCTTTACTATCCTGAAACAGATGGTATGGCAGAATTCCCCTCACCAGAATCATTGAAAGATCGAATTCTTATATCAACCAAACCACCAAAAGAGTATCTTGAATCTGAATGTTCATCGCCAACAGGTCAAATGGATGAAACAGAAACTGATAGCAAGGATGAAACTGATGAAGAAGTGGAAGATTTGAATGCAAGTGAAGAAAAATCACTCCAGCAATGTGCACCTGCATATGGGCGCTTAATCACAATCCATGCTGGGAAACCTAAAGGTCAAGCAAAAGATTATTTAAGCGTGGCTGGTGATGTCAGACGCCTAAGCATGTTCACACAGAAGAATATTCTCAGGGTTTATCCGAAAGGAACACGTGTCTCTTCATCAAATTACAGACCACATATTGGGTGGAATTATGGAGCTCAGATGGTTGCATGCAACATGCAGGGGTATGGGAGATCACTATGGTTCATGCAAGGGATGTTTAGAGCAAATGGAGGTTGTGGCTATGTGAAAAAGCCCGATTGCTTAGTGGAAAGTGGTCCCAATGGTGAGGTTTTCGATCCTAACAGAACATTGCCAGTGAAGACGACATTAAAGGTTAAAGTATATTTAGGGACCGGATGGAGCTCAGATTTCAGCCAAACACACTTTGATTCATTCTCTCCACCAGACTTTTACACAAAGGTTTGTATAGTTGGAGTAGATAATGATAAAGTCAAGAAGAAAACAAAGGTAATAGACGACGATTGGTTTCCAGTTTGGAATGAAGGGTTTGAATTCCCTCTGACTGTTCCAGAGTTGGCTTTACTGAGGATAGAAGTTAGAGAGTATGACAGGCATGAAGCGGATGACTTTGGTGGGCAGGCGTGTTTGCCGGTTCCTGAGCTAAGATATGGATTCCGGTCAGTCCCTCTATACGACAAAAAGGGCAGCCAACTCAAATCTGTGAGGCTTTTCATGCATTTTCAGTTTGTTTCATACTAG 1680 0.4262 MGTYHYKIFNCFNLKFTVSEPGPPEDVKYVFYKFSSGADHLSADQLGLFLVKHQGESDLTSSNPAQIVEKILQSRDQNEEIEATEATSSVEGISLDEFFHFLLLDDFNAPLKSQVHHDMNAPLSHYFIYTGHNSYLTGNQLSSDCSDVPIIKALLEGVRVIELDLWPNSTRDDVIVVHGRTLTSPVALIQCLKSIKEYAFVKSHYPVIITLEDHLPTDLQAKVAEMVTQTFGEALYYPETDGMAEFPSPESLKDRILISTKPPKEYLESECSSPTGQMDETETDSKDETDEEVEDLNASEEKSLQQCAPAYGRLITIHAGKPKGQAKDYLSVAGDVRRLSMFTQKNILRVYPKGTRVSSSNYRPHIGWNYGAQMVACNMQGYGRSLWFMQGMFRANGGCGYVKKPDCLVESGPNGEVFDPNRTLPVKTTLKVKVYLGTGWSSDFSQTHFDSFSPPDFYTKVCIVGVDNDKVKKKTKVIDDDWFPVWNEGFEFPLTVPELALLRIEVREYDRHEADDFGGQACLPVPELRYGFRSVPLYDKKGSQLKSVRLFMHFQFVSY 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0922 559 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 117 261 - -
Lele27g0922 559 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 292 408 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Lele27g0922 559 SUPERFAMILY EF-hand 9 119 IPR011992 -
Lele27g0922 559 Pfam C2 domain 430 528 IPR000008 -
Lele27g0922 559 MobiDBLite consensus disorder prediction 283 297 - -
Lele27g0922 559 ProSiteProfiles C2 domain profile. 410 539 IPR000008 -
Lele27g0922 559 FunFam Phosphoinositide phospholipase C 114 422 - -
Lele27g0922 559 FunFam Phosphoinositide phospholipase C 424 557 - -
Lele27g0922 559 MobiDBLite consensus disorder prediction 265 302 - -
Lele27g0922 559 PRINTS Phospholipase C signature 148 168 IPR001192 GO:0035556
Lele27g0922 559 PRINTS Phospholipase C signature 523 533 IPR001192 GO:0035556
Lele27g0922 559 PRINTS Phospholipase C signature 122 140 IPR001192 GO:0035556
Lele27g0922 559 PRINTS Phospholipase C signature 245 262 IPR001192 GO:0035556
Lele27g0922 559 PRINTS Phospholipase C signature 368 386 IPR001192 GO:0035556
Lele27g0922 559 PRINTS Phospholipase C signature 347 368 IPR001192 GO:0035556
Lele27g0922 559 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 429 556 IPR035892 -
Lele27g0922 559 Gene3D - 23 113 - -
Lele27g0922 559 Gene3D C2 domain 424 559 IPR035892 -
Lele27g0922 559 Gene3D Phosphatidylinositol (PI) phosphodiesterase 114 421 IPR017946 GO:0006629|GO:0008081
Lele27g0922 559 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 338 407 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Lele27g0922 559 SMART plcx_3 117 261 IPR000909 -
Lele27g0922 559 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 9 556 IPR001192 GO:0035556
Lele27g0922 559 SUPERFAMILY PLC-like phosphodiesterases 117 410 IPR017946 GO:0006629|GO:0008081
Lele27g0922 559 Pfam Phosphatidylinositol-specific phospholipase C, X domain 119 261 IPR000909 -
Lele27g0922 559 CDD C2_PLC_like 427 556 - -
Lele27g0922 559 SMART plcy_3 311 409 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Lele27g0922 559 SMART C2_3c 429 537 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0922 Lele-ChrLele27 17148637 17153282 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0922 2 556 Acyl Lipid Metabolism Gene Families AT2G40116 56.837 0.0 674
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele27g0921 27 17141992 17145253 Lele27g0922 27 17148637 17153282 CCT
Lele25g1158 25 7504698 7516712 Lele27g0922 27 17148637 17153282 CCT
Lele27g0922 27 17148637 17153282 Lele27g0923 27 17162913 17167247 CCT
Lele27g0922 27 17148637 17153282 Lele25g1174 25 7663490 7666752 CCT
Lele27g0922 27 17148637 17153282 Lele26g1175 26 7632645 7636402 CCT
Lele27g0922 27 17148637 17153282 Lele27g0906 27 17017612 17020825 CCT
Lele27g0922 27 17148637 17153282 Lele28g1168 28 7618012 7621760 CCT
Lele27g0922 27 17148637 17153282 Lele28g1150 28 7482135 7485334 ECH
Lele27g0922 27 17148637 17153282 Lele27g0922 27 17148637 17153282 ECH
Lele25g1158 25 7504698 7516712 Lele27g0922 27 17148637 17153282 hybridization
Lele26g1157 26 7490783 7494089 Lele27g0922 27 17148637 17153282 hybridization