Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0921 ATGTCACTCCCTAGTAACAACGATTCTCCTTTGAAGGAAGAAGAAGAGGAAGAGGAAGAAGAATCAGAAGAAGAAGAAGAAGAAGAGAGGATTGTTGAAAACATGAAGACCTATAACAAGTACAAGTGGCTCTTGTTCTTCACCAGAAACTACAAAAGCAACGATCTGGCTCCACCCCGGGACCTCAAGGAGGCCTTCTCCAACTTCGCCGGCGGTGGGGACCGCATGTCCGTCGACCAGTTCCGGCGGTTCCTGGGGGAGCATCAAGGCCACGTGGACTGTGCCGTATCGGAATCGGAGGAAATCGTCGACAAGATCCTGAAAGCTCGAAAGGGAAGTCACGACGATGATCAGCGAACTGAACAACAACAACAACATGAACTCACTCTCGAAGACATCTTCCATTTTCTTCTTCTCGACGATTTCAACAGTCCTCTGAAATCTGAGGTTCATCATGATATGCAAGCTCCGTTGTCACGCTATTTCATATACACAGGGCATAATTCATATCTTACTGGGAATCAATTGAGCAGTGATTGCAGTGAAAAACCGATCATTAAGGCTCTGCAACGAGGCGTGAGGGCCATCGAACTAGATTTATGGCCTACTTCCAACAAAGATGATATTAAAGTAGTTCATGGATGGACTCTTACCAATCCTGTTTCACCTCATAAATGTTTGGAGGCAATAAAGAAATATGCTTTTGTGAAATCTGAGTACCCAGTTATTATAACTATTGAAGACCACCTTACAAGAGATCTTCAAGCTAAATTTGCAGAGATGGCTACTCAAATACTAGGAGAATTGCTATATTATCCTCAGGGGAAACTTTTGACAGAATTCCCATCACCAAAATCATTGAAAAACAAAATAATTATATCCACCAAACCTCCAAAAGAACATCTCTGTGAATGTATTGAAGATAAAGGTAACAACGATGTGCAAGATGGAAGTGAATCATCTGAAGAAGAAACATCATGGGGACAAGAATCTCCAGACTCCATGGCTGAACCAGAGGCAACTGAGAACAAAGTGGCTGAACCAGAAACTGAGAACAAGGTGAGTCAGAATGGAAGTGAGAAAGAAGAGGGAGATTCAAATGGAGGTGATGAACAACATAGGACAGATAAAAAGTGTTCAGCTGATTATAAACGGTTAATCACAATCCATGCGAAGAAACTCAAGGGTAGTTTAAAGGATAAATTGAGGATTGAAGAGGAAGTTAGACGCCTAAGTTGGAATGAGCAGACACTTGAAAAGGCTTGTGAATCTCATGGAACTGATATTATAAGGTTCACGCAGAGAAACATCCTCAGGGTATACCCAAAAGGAACACGTGTCCAATCCTCAAATTTCAAGCCCCATAAAGGGTGGGTGTATGGAGCTCAAATGGTGGCATTCAATATGCAGAAGCATGGGAAGGAACTGTGGTTGATGCAGGGAATGTTCAGGGCAAATGGAGGTTGTGGTTATGTGAAAAAACCAGAAATAGTAATGCAGAATCTTCCAAATGGAGAACTGTTTGATCCTAAAAGAACATTGCCAGTGAAAAAAACATTAAAGGTAAATGTGTACATGGGACATGGTTGGAGCTCAGATTTCAGTCCCACCCACTTTGACAAGTTCTCTCCGCCAGACTTCTACACAAAGGTCAGTATTGTAGGAGTGCCAGCTGACTGTGTCAGGAAGAGCACAAGGGTAATAATGGACAATTGGTTTCCTGTTTGGGAAGAGGAATTCAAATTCCCATTAACAGTGCCAGAGCTGGCATTGCTTAGGATAATAGTGAGGGAAAAAGACCAGGGAAAAGATGACTTTGGTGGTCAGACATGTTTGCCCATCTCAGAGCTAAGACTTGGATTTCGTTCAGTCCCTTTGTATAACAGAAAGGGAGAGAAATACAAATCTGTAAAGCTTTTCATGCGGTTTCAGTTCATTGACCAAGAAAATTTAGTTTCAGTCAAATGA 1968 0.4217 MSLPSNNDSPLKEEEEEEEEESEEEEEEERIVENMKTYNKYKWLLFFTRNYKSNDLAPPRDLKEAFSNFAGGGDRMSVDQFRRFLGEHQGHVDCAVSESEEIVDKILKARKGSHDDDQRTEQQQQHELTLEDIFHFLLLDDFNSPLKSEVHHDMQAPLSRYFIYTGHNSYLTGNQLSSDCSEKPIIKALQRGVRAIELDLWPTSNKDDIKVVHGWTLTNPVSPHKCLEAIKKYAFVKSEYPVIITIEDHLTRDLQAKFAEMATQILGELLYYPQGKLLTEFPSPKSLKNKIIISTKPPKEHLCECIEDKGNNDVQDGSESSEEETSWGQESPDSMAEPEATENKVAEPETENKVSQNGSEKEEGDSNGGDEQHRTDKKCSADYKRLITIHAKKLKGSLKDKLRIEEEVRRLSWNEQTLEKACESHGTDIIRFTQRNILRVYPKGTRVQSSNFKPHKGWVYGAQMVAFNMQKHGKELWLMQGMFRANGGCGYVKKPEIVMQNLPNGELFDPKRTLPVKKTLKVNVYMGHGWSSDFSPTHFDKFSPPDFYTKVSIVGVPADCVRKSTRVIMDNWFPVWEEEFKFPLTVPELALLRIIVREKDQGKDDFGGQTCLPISELRLGFRSVPLYNRKGEKYKSVKLFMRFQFIDQENLVSVK 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0921 655 FunFam Phosphoinositide phospholipase C 514 646 - -
Lele27g0921 655 MobiDBLite consensus disorder prediction 340 377 - -
Lele27g0921 655 SUPERFAMILY EF-hand 58 154 IPR011992 -
Lele27g0921 655 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 412 498 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Lele27g0921 655 SMART plcy_3 383 499 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Lele27g0921 655 SMART plcx_3 152 296 IPR000909 -
Lele27g0921 655 Coils Coil 11 35 - -
Lele27g0921 655 CDD C2_PLC_like 517 645 - -
Lele27g0921 655 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 406 496 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Lele27g0921 655 Pfam C2 domain 519 618 IPR000008 -
Lele27g0921 655 ProSiteProfiles C2 domain profile. 503 628 IPR000008 -
Lele27g0921 655 MobiDBLite consensus disorder prediction 11 30 - -
Lele27g0921 655 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 519 646 IPR035892 -
Lele27g0921 655 Gene3D C2 domain 514 654 IPR035892 -
Lele27g0921 655 SUPERFAMILY PLC-like phosphodiesterases 152 500 IPR017946 GO:0006629|GO:0008081
Lele27g0921 655 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 152 296 - -
Lele27g0921 655 SMART C2_3c 519 626 IPR000008 -
Lele27g0921 655 Gene3D - 54 147 - -
Lele27g0921 655 PRINTS Phospholipase C signature 437 458 IPR001192 GO:0035556
Lele27g0921 655 PRINTS Phospholipase C signature 612 622 IPR001192 GO:0035556
Lele27g0921 655 PRINTS Phospholipase C signature 183 203 IPR001192 GO:0035556
Lele27g0921 655 PRINTS Phospholipase C signature 280 297 IPR001192 GO:0035556
Lele27g0921 655 PRINTS Phospholipase C signature 458 476 IPR001192 GO:0035556
Lele27g0921 655 PRINTS Phospholipase C signature 157 175 IPR001192 GO:0035556
Lele27g0921 655 Pfam Phosphatidylinositol-specific phospholipase C, X domain 154 296 IPR000909 -
Lele27g0921 655 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 39 645 IPR001192 GO:0035556
Lele27g0921 655 MobiDBLite consensus disorder prediction 309 377 - -
Lele27g0921 655 MobiDBLite consensus disorder prediction 1 31 - -
Lele27g0921 655 Gene3D Phosphatidylinositol (PI) phosphodiesterase 148 511 IPR017946 GO:0006629|GO:0008081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0921 Lele-ChrLele27 17141992 17145253 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0921 24 645 Acyl Lipid Metabolism Gene Families AT2G40116 53.810 0.0 667
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g1158 26 7510919 7513554 Lele27g0921 27 17141992 17145253 CCT
Lele27g0920 27 17133338 17136688 Lele27g0921 27 17141992 17145253 CCT
Lele28g1151 28 7487404 7493158 Lele27g0921 27 17141992 17145253 CCT
Lele25g1159 25 7521680 7524962 Lele27g0921 27 17141992 17145253 CCT
Lele27g0921 27 17141992 17145253 Lele25g1158 25 7504698 7516712 CCT
Lele27g0921 27 17141992 17145253 Lele26g1157 26 7490783 7494089 CCT
Lele27g0921 27 17141992 17145253 Lele27g0922 27 17148637 17153282 CCT
Lele27g0921 27 17141992 17145253 Lele28g1150 28 7482135 7485334 CCT
Lele25g1149 25 7411628 7413032 Lele27g0921 27 17141992 17145253 CCT
Lele27g0921 27 17141992 17145253 Lele27g0921 27 17141992 17145253 ECH
Lele25g1159 25 7521680 7524962 Lele27g0921 27 17141992 17145253 hybridization