Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0920 ATGTTGAACAGCTCGTTTCACATGAATGGACCGTTTATGTGTTTGGGCCGTGTTTGGCTGTTCAGAGTCGGCATATTAGAAGGAAACCGAAGTTACGCCAGGAATCGGAATGAGTTAAAGAAAATCGGACGGGAAAACCCAGTGGAAGAGGATTTGGAGGGAGTCACCCACAAAGTGTTTTTTGATATAGAGATCGATGGGAAACTTGCGGGTCGCATAGTCATGGGACTTTTTGGAGCGGTGGTTCCAAAAACTGTAGGTATGAATATGATGCAACTGTGCAGTAAATCACTCTTTTTCGGCTGCTTGTGGAGACAGATTAATTTGGTTTCAAGGATTTGGTTACTAATCTCACATCCCTTTCGTGCAGAAAACTTCCGAGCACTTTGTACTGGAGAGAAAGGCGTGGGAAAAAGCGGGAAGCCTCTTCATTACAAAGGAAGCACATTCCATAGGATAATACCCAGCTTTATGATCCAAGGGGGTGATTTCACCCGTGGTGATGGGCGAGGGGGAGAATCGATCTATGGTTCTAAGTTTGCTGATGAAAACTTCAAAGTGAAGCATAATGGACCAGGATACTTGTCGATGGCGAATGCGGGGACGGACACAAATGGCTCACAATTTTTTATAACAACGGTTAAAACTAGCTGGTTGGACAGCCGGCATGTTGTATTTGGGAAGGTGATCTCGGGGATGGACGTTGTCTACAAGATCGAAGCACAAGGAAGCGCTAATGGCGACCCCAAAGGCAAGGTTCTTATACTTGACAGTGGCGAATTAACTTCATGA 792 0.4533 MLNSSFHMNGPFMCLGRVWLFRVGILEGNRSYARNRNELKKIGRENPVEEDLEGVTHKVFFDIEIDGKLAGRIVMGLFGAVVPKTVGMNMMQLCSKSLFFGCLWRQINLVSRIWLLISHPFRAENFRALCTGEKGVGKSGKPLHYKGSTFHRIIPSFMIQGGDFTRGDGRGGESIYGSKFADENFKVKHNGPGYLSMANAGTDTNGSQFFITTVKTSWLDSRHVVFGKVISGMDVVYKIEAQGSANGDPKGKVLILDSGELTS 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0920 263 FunFam Peptidyl-prolyl cis-trans isomerase 106 261 - -
Lele27g0920 263 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 114 129 IPR002130 GO:0000413|GO:0003755
Lele27g0920 263 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 208 220 IPR002130 GO:0000413|GO:0003755
Lele27g0920 263 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 221 236 IPR002130 GO:0000413|GO:0003755
Lele27g0920 263 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 193 208 IPR002130 GO:0000413|GO:0003755
Lele27g0920 263 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 150 162 IPR002130 GO:0000413|GO:0003755
Lele27g0920 263 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 58 261 - -
Lele27g0920 263 CDD cyclophilin_ABH_like 57 259 - -
Lele27g0920 263 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 120 257 IPR002130 GO:0000413|GO:0003755
Lele27g0920 263 Gene3D - 117 263 IPR029000 -
Lele27g0920 263 Gene3D - 48 102 IPR029000 -
Lele27g0920 263 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 60 260 IPR002130 GO:0000413|GO:0003755
Lele27g0920 263 SUPERFAMILY Cyclophilin-like 55 102 IPR029000 -
Lele27g0920 263 SUPERFAMILY Cyclophilin-like 120 261 IPR029000 -
Lele27g0920 263 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 145 162 IPR020892 GO:0003755|GO:0006457
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0920 Lele-ChrLele27 17133338 17136688 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0920 120 240 U-box Gene Family AT5G67530 47.541 8.80e-24 98.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele27g0920 27 17133338 17136688 Lele25g1159 25 7521680 7524962 CCT
Lele27g0920 27 17133338 17136688 Lele27g0921 27 17141992 17145253 CCT
Lele27g0920 27 17133338 17136688 Lele28g1151 28 7487404 7493158 ECH
Lele27g0920 27 17133338 17136688 Lele27g0920 27 17133338 17136688 ECH
Lele25g1160 25 7533362 7535139 Lele27g0920 27 17133338 17136688 hybridization
Lele26g1158 26 7510919 7513554 Lele27g0920 27 17133338 17136688 hybridization