Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0912 ATGGCTGCCCCCGCCACTTCCGCCGCCACTTCATACTTCTTCGGCACGCGGCTTGCCACCAACAATCCCTCCTCTGACTCCGGCAGATTCCACGCCCTGCTTAAGTTCGGTACCAAGAAGAAGGCCGCCCCGCCTCCCCCGTCCCCCAAAAAAGTGTCGTCCAACACCAAACCATCAGGAGATCGGCTCGTGTGGTTCCCGGGTGCCAAACCACCGGAATGGCTCGACGGAACCATGGTTGGAGACCGTGGGTTCGATCCATTTGGGTTGGGGAAACCTGCAGAGTATTTACAGTTCGACTTAGACTCGCTGGACCAGAATCTAGCTAAGAATGTGGCCGGAGAAATAATCGGAACCAGACTGGAGACCACGGATGTTAAACCAACGCCGTTTCAGCCATACACGGAGGTGTTCGGGTTGCAGAGGTTCCGCGAGTGTGAGGTGATTCATGGAAGGTGGGCAATGCTTGGAGCACTTGGTGCCTTGGCCGTTGAGGCATTTACTGGAGTCGCATGGCAAGACGCTGGAAAGGTGGAGCTGGTGGAAGGGTCATCCTATCTGGGTCTTCCTCTTCCATTCTCATTGACCACACTGATCTGGATTGAGGTGATATTGATAGGCTACATTGAATTCCAAAGAAATGCAGAACTTGACCCAGAAAAGAGGATATACCCAGGTGGCAAGTTCTTCGATCCCCTCGGCTTGGCCAACGACCCCGAAGAGAAGGCCAGACTTCAACTTGCAGAGATCAAGCACTCCAGGTTAGCCATGGTGGTTTTCCTCATCTTTGCAATTCAAGCTGCTGTTACAGGCAAAGGTCCCATCGCTTTTATTGCTACCTTTAACAAGTGA 852 0.5305 MAAPATSAATSYFFGTRLATNNPSSDSGRFHALLKFGTKKKAAPPPPSPKKVSSNTKPSGDRLVWFPGAKPPEWLDGTMVGDRGFDPFGLGKPAEYLQFDLDSLDQNLAKNVAGEIIGTRLETTDVKPTPFQPYTEVFGLQRFRECEVIHGRWAMLGALGALAVEAFTGVAWQDAGKVELVEGSSYLGLPLPFSLTTLIWIEVILIGYIEFQRNAELDPEKRIYPGGKFFDPLGLANDPEEKARLQLAEIKHSRLAMVVFLIFAIQAAVTGKGPIAFIATFNK 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0912 283 Gene3D Chlorophyll a/b binding protein domain 64 283 - -
Lele27g0912 283 SUPERFAMILY Chlorophyll a-b binding protein 59 280 - -
Lele27g0912 283 MobiDBLite consensus disorder prediction 35 60 - -
Lele27g0912 283 Pfam Chlorophyll A-B binding protein 71 267 IPR022796 -
Lele27g0912 283 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 21 279 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0912 Lele-ChrLele27 17068277 17070594 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0912 14 280 Chloroplast and Mitochondria Gene Families AT3G08940 72.285 2.52e-136 385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele27g0912 27 17068277 17070594 Lele27g0912 27 17068277 17070594 ECH
Lele25g1167 25 7614331 7616260 Lele27g0912 27 17068277 17070594 hybridization
Lele26g1166 26 7584313 7586357 Lele27g0912 27 17068277 17070594 hybridization