Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0903 ATGGTCGATTTGCATTGGAAATCTAACCTCGTTAGCTCCGATATGCCTACCAAGCTCTCCCCCACCTCCGATATCCCCCGGGTCATGTCCCTTCCGCCTTTGACGGCGCCTTTTTACGCCACTGATATCTCTGCGTCGTCTTCTCTGGCTTGCTCTGCTTACGACCACTATCTTCGTCTTCCTCAGCTTAGGAAGCTTTGGAGCTCCGACGACTTCCCCGATTGGAAGAGCGAACCCATCTTCAAGCCTGCTTTACACGCGCTTGAGATCACCTTCCGCTTGCTCTCCACCGTTTTGTTGGACCCCAGACCCTACGTCAACCGTCGCCAATGGCTCCGACGCATTGAATCACTCGTCGTCGCCGAGATCGAGACCATCTCGTCGCTCTGCGAGGACGACGAAGATGGCCCCGAGACACGTGCCACGGCTCCAACGGCTGACCTCAGCAAGAGCGAGGGCGTGAGTTACAGCGAGGCCAGCTTGCTTCCTCGATTGGCCACATGGTACAAATCTAAGGACGTAGCGCAGAGGATCCTCCACGTAATCGAATCTCAGATGAGGAGGTGTCCCTACACTCTGGGTTTAGGGGAGATGAATATCGCTGGAAAACCAAGCCTCCGGTACGACGCCGTATGCAGGCCGAGGGAGATTCATTCCCTGAACAAGGCGCCGAACGACGATCTCATCGAGAGGTGCGAGAACCAGACGGTGTACACGACACACCAGATCATAGAGTCGTGGATCCACGTGGCCCGCCAGCTGCTCGGCAGAATCACCGAGAGAATCCAAAGCAAGAAATTTGATAAGGCCACGGAAGATTGCTACATGGTGGAGCGGATCTGGAAGATCCTCGCCGATATCGAAGAACTCCACCTTCTAATGGATCCCGACGATTTCCTGCGTCTGAAGAGCCAGCTTTTGATCAGATCGACGGGGGAGACGACGGCGTTTTGCTTCCGGTCGAAGGAGCTGGTGGAGGTAACGAATCTGTGCAAGGATCTGAAGCACAAGGTGCCGGAGATATTGGAAGTGGAGGCGGACCCAAAGGGAGGACCGAGGATTCAGGAGGCGGCGATGAAACTGTACGTGGACAAGAATGAGAAGAGTGGGTTCGAGAAGGTTCAGTTGCTTCAGGCGATGCAGGGAATAGAGTCGGCGATGAAGAAGTTCTTCTTCACATACAAGCAGGTTCTGGTGGTGGTGATGGGGAGCTCGGAGGCGAGTGGGAACCGAGTTGGGATGAGGTCGGAATCGGGCGACTCACTGAGTCAGATATACATGGAGCCAACCTATTTTCCGAGTTTGGATGCTGCAAAGACATTTCTGGGTTATTTTTGGGATAACGAACACCGATGTTACTAG 1362 0.5426 MVDLHWKSNLVSSDMPTKLSPTSDIPRVMSLPPLTAPFYATDISASSSLACSAYDHYLRLPQLRKLWSSDDFPDWKSEPIFKPALHALEITFRLLSTVLLDPRPYVNRRQWLRRIESLVVAEIETISSLCEDDEDGPETRATAPTADLSKSEGVSYSEASLLPRLATWYKSKDVAQRILHVIESQMRRCPYTLGLGEMNIAGKPSLRYDAVCRPREIHSLNKAPNDDLIERCENQTVYTTHQIIESWIHVARQLLGRITERIQSKKFDKATEDCYMVERIWKILADIEELHLLMDPDDFLRLKSQLLIRSTGETTAFCFRSKELVEVTNLCKDLKHKVPEILEVEADPKGGPRIQEAAMKLYVDKNEKSGFEKVQLLQAMQGIESAMKKFFFTYKQVLVVVMGSSEASGNRVGMRSESGDSLSQIYMEPTYFPSLDAAKTFLGYFWDNEHRCY 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0903 453 PANTHER NEMATODE RESISTANCE PROTEIN-LIKE HSPRO1 1 450 IPR038759 -
Lele27g0903 453 Pfam Hs1pro-1 N-terminus 1 183 IPR009869 GO:0006952
Lele27g0903 453 Gene3D - 208 357 - -
Lele27g0903 453 Pfam Hs1pro-1 protein C-terminus 186 448 IPR009743 -
Lele27g0903 453 SUPERFAMILY Indolic compounds 2,3-dioxygenase-like 208 442 IPR037217 GO:0019441|GO:0020037|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0903 Lele-ChrLele27 16985724 16987085 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele28g1152 28 7495557 7495976 Lele27g0903 27 16985724 16987085 CCT
Lele25g1164 25 7577944 7579902 Lele27g0903 27 16985724 16987085 CCT
Lele27g0903 27 16985724 16987085 Lele27g0903 27 16985724 16987085 ECH
Lele25g1177 25 7738359 7740074 Lele27g0903 27 16985724 16987085 hybridization
Lele26g1179 26 7674361 7674996 Lele27g0903 27 16985724 16987085 hybridization