Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0893 ATGGCTATGGACTATCGAAACGTGAGGGGAATGAGCACCGGGTTAACCGATGTGGTCCCGGAACGTGTTATGGCTTTTATTCATGACCCCAAAGATCGGGATGCGGTTTCTCTCGTTTGTCGGCAGTGGTACGAGATGGACTGCTTGACCCGAAAGCACGTGACGATTGCTCTCTGCTATACGACCACCCCGGACCAACTCCGACGGAGATTTCCGCACCTCGAGTCGCTGAAGCTGAAAGGGAAACCAAGGGCGGCGATGTTCAATTTGATTCAGGATGATTGGGGAGGATATGTGGGACCTTGGATTAAAGAGATTGCAAAATATTTTGATTGTTTGAAGTCCCTTCATTTCCGTCGCATGATTGTGAGGGATTCCGACCTTGATCTTCTTGCGCGGTCACGGGGAGACGTTCTTCAAGCTCTTAAACTCGACAAGTGTTCTGGTTTTTCCACGGATGGCCTTCACCATATCGGCCGGTCTTGCAGGAATTTAAGAGTCTTGTTTTTGGAGGAGAGCCAAATTGTTGAGAATGATGGCGAATGGCTACATGAGCTGGCTTTGAATAATACTGTTCTTGAGGCTCTAAATTTTTACGTGACAGATCTTATCAATATCAGAATTGAGGACCTTGAACTTATTGCAAAAAACTGTCGCAACTTGGTTTCTGTGAAAATTACTGATATTGAGATCCTGAAGCTTGTAAACTTCTTTCGTTCTGCATCTGCCCTAGAAGAGTTTTGTGGAGGCTCCTACAACGAGCAGCCGGAAAAGTACGCTGCCGTATCATTTCCTGCTAAGTTATGTCGATTGGGTTTGACATATATTGGAAAGAATGAACTTCCAATAGTATTCCCTTTCGCATCCCTTCTAAAAAAGTTGGATCTCCTATATTCGATGTTGGATACAGAGGATCATTGTACAATAATCCAAAAGTGCCCCAACTTGGAAGTCCTTGAGTCAAGGAATGTAATCGGTGATAGAGGACTCGAAGTTCTTGCACAAAGCTGTAAGAGGCTCAAGAGACTCAGGATTGAGCGAGGAGATGATGAGCAAGGAATGGAGGATGAAGAAGGTGTTGTTTCTCAGAGAGGGTTGATTGCTCTGTCACAGGGCTGTCCAGAACTCGAATATCTGGCTGTTTATGTATCTGACATTACAAATGCATCCCTAGAACAAATTGGCACTCACATGAAAAACCTCACTGATTTCCGCCTCGTCTTGCTAGACCGTGAGGCAACCATAACAGATTTACCTCTTGACAATGGGGTGAGAGCTTTATTAAGAGGTTGTGATAAGCTCAGAAGATTTGCTCTGTATCTTCGCTCCGGGGGCCTGACCGATGTTGGCCTCGCCTACATCGGGCGATACAGCCAAAATGTGAGATGGATGCTTCTGGGTTATGTAGGGGAATCTGATGAAGGGCTTCTGGAGTTCTCAAGGGGCTGCCCTAGCCTTCAAAAGCTTGAAATGAGAGGCTGTTGCTTCAGTGAGTATGCATTAGCCGTGGCTGCCACACGACTGACTTCTCTAAGGTATCTATGGGTGCAAGGGTATAGACAATCTGCATCTGGGCGTGATCTTTTTGCAATGGCAAGACCCTTCTGGAATATTGAACTGATTCCTTCTAGGAGAGTTGTTGTTACTTATCAAAGTGGAGAACCTGTAGTGGTTGAGCATCCAGCACATATTCTTGCATATTACTCTCTTGCAGGACCAAGATTAGATTGTCCAGATTCTGTTGTTCCTCTGGATCCAACGGCAGCAGCATATGTTGAAAGTTAG 1785 0.456 MAMDYRNVRGMSTGLTDVVPERVMAFIHDPKDRDAVSLVCRQWYEMDCLTRKHVTIALCYTTTPDQLRRRFPHLESLKLKGKPRAAMFNLIQDDWGGYVGPWIKEIAKYFDCLKSLHFRRMIVRDSDLDLLARSRGDVLQALKLDKCSGFSTDGLHHIGRSCRNLRVLFLEESQIVENDGEWLHELALNNTVLEALNFYVTDLINIRIEDLELIAKNCRNLVSVKITDIEILKLVNFFRSASALEEFCGGSYNEQPEKYAAVSFPAKLCRLGLTYIGKNELPIVFPFASLLKKLDLLYSMLDTEDHCTIIQKCPNLEVLESRNVIGDRGLEVLAQSCKRLKRLRIERGDDEQGMEDEEGVVSQRGLIALSQGCPELEYLAVYVSDITNASLEQIGTHMKNLTDFRLVLLDREATITDLPLDNGVRALLRGCDKLRRFALYLRSGGLTDVGLAYIGRYSQNVRWMLLGYVGESDEGLLEFSRGCPSLQKLEMRGCCFSEYALAVAATRLTSLRYLWVQGYRQSASGRDLFAMARPFWNIELIPSRRVVVTYQSGEPVVVEHPAHILAYYSLAGPRLDCPDSVVPLDPTAAAYVES 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0893 594 Gene3D Ribonuclease Inhibitor 52 588 IPR032675 -
Lele27g0893 594 Pfam F-box 13 53 IPR041567 -
Lele27g0893 594 SUPERFAMILY RNI-like 365 521 - -
Lele27g0893 594 SUPERFAMILY RNI-like 92 405 - -
Lele27g0893 594 FunFam Coronatine-insensitive protein 1 52 587 - -
Lele27g0893 594 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 31 247 - -
Lele27g0893 594 Pfam Transport inhibitor response 1 protein domain 72 118 IPR041101 -
Lele27g0893 594 Gene3D - 3 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0893 Lele-ChrLele27 16907557 16911150 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g1192 26 7759642 7760603 Lele27g0893 27 16907557 16911150 CCT
Lele27g0892 27 16899624 16900574 Lele27g0893 27 16907557 16911150 CCT
Lele28g1184 28 7735073 7736031 Lele27g0893 27 16907557 16911150 CCT
Lele25g1185 25 7800085 7803831 Lele27g0893 27 16907557 16911150 CCT
Lele27g0893 27 16907557 16911150 Lele27g0893 27 16907557 16911150 ECH
Lele25g1185 25 7800085 7803831 Lele27g0893 27 16907557 16911150 hybridization
Lele26g1191 26 7749338 7753330 Lele27g0893 27 16907557 16911150 hybridization