Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0887 ATGAAAACCCTCGATCCCTTGCTCTCCGCCGATCTCCGCTTCTGCATCAACTGGGGAGTGTCGCCAACCAATCCGAAGATGGTGAAGGGACGCCAAGGAGAGCGAGTCAGACTCTATGTTCGAGGTTCAATCCTTGGATACAAGAGGTCCAAGTCTAACCAATACCCAAATACATCACTTATCCAGATTGAGGGAGTGAACTCCAAGGAAGAGGTTGCATGGTACTGTGGTAAACGCATGGCGTACATTTACAAGGCCAAGGTGAAGAAAAACGGAAGCCACTATCGCTGCATTTGGGGTAAAGTTACCCGGCCTCATGGTAACAGTGGTGTTGTCCGTGCCAAATTCAAGTCAAATCTGCCACCCAAATCAATGGGAGCAAGGGTCAGAGTTTTCATGTATCCAAGCAATATTTGA 417 0.482 MKTLDPLLSADLRFCINWGVSPTNPKMVKGRQGERVRLYVRGSILGYKRSKSNQYPNTSLIQIEGVNSKEEVAWYCGKRMAYIYKAKVKKNGSHYRCIWGKVTRPHGNSGVVRAKFKSNLPPKSMGARVRVFMYPSNI 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0887 138 SUPERFAMILY Translation proteins 38 132 IPR009000 -
Lele27g0887 138 PANTHER 60S RIBOSOMAL PROTEIN L35A 28 138 IPR001780 GO:0003735|GO:0005840|GO:0006412
Lele27g0887 138 FunFam 60S ribosomal protein L35a 33 138 - -
Lele27g0887 138 Pfam Ribosomal protein L35Ae 38 132 IPR001780 GO:0003735|GO:0005840|GO:0006412
Lele27g0887 138 Hamap 50S ribosomal protein L35Ae [rpl35ae]. 40 132 IPR001780 GO:0003735|GO:0005840|GO:0006412
Lele27g0887 138 ProSitePatterns Ribosomal protein L35Ae signature. 100 121 IPR018266 GO:0003735|GO:0005840|GO:0006412
Lele27g0887 138 Gene3D translation elongation factor selb, chain A, domain 4 32 138 IPR038661 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0887 Lele-ChrLele27 16871049 16872485 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0887 27 138 Cytoplasmic Ribosomal Protein Gene Family AT1G07070 91.071 2.52e-74 215
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1190 25 7839753 7841052 Lele27g0887 27 16871049 16872485 hybridization
Lele26g1197 26 7791724 7794018 Lele27g0887 27 16871049 16872485 hybridization