Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0884 ATGAAGAAGCTCTGCCCTAATCTTGATCGCGAGGATGCGCTCGAGACGGTTCTCGAGGTCCCAGTCCCCGAAGAAATTTTCACCCCCAAGAACGGAACTGCCAGAGCCTGGCAGAACATGGTGTCCTGGATGAAGCCCAATACTGATTCCAGATCATCCGCGGCGCTCTACGGAGGCCGCAACACGGAGATCCAGCTTTTGTTGGGGGTCGTCGGAGCACCGTTAATTCCTTTCCCTATCAACTCCGAGAGCCAGACTATCAGTCGCAGCATCAAAGACCTGCATATTGAGGCGTCCATGGCGAAATATATAGTAAAACAGTATGTGGCGGCGGTGGGAGGAGAGCGTCCGTTGAATTCGATAGAAAGCATGTACGCGATGGGGCAAGTTAGAATGGGGGCGTCTGAGTTTGGCGCAGGGGAAGGGAACGGGAATGGTGTGAAGAAGATGGCGAAGGTGAAGAAGGCACAGACATCGGCAGAGATGGGAGGGTTCGTGGTGTGGCAGAAGAGGCCGGCGCTTTGGTGCTTGGAGCTGGTGGTTTCCGGTTACAAGATCAGCGCCGGGAGCGACGGAAATGTTGCGTGGAGGCAAACCCCTTGGCATCACTCTCATGCTTCTCGCGGCCCACCCAGACCTCTCAGGCGTTTCCTACAGGGTCTTGATCCAAGGTCAACAGCCAATCTGTTCATGAACTCTATATGCATAGATGAGAAGACACTGAACAATGAGGACTGTTTCATATTAAAACTGGAGGCCGAATCCTCAGCACTTAGAGCAAGAAGTAGCAGCAATGTAGAGATAATACGCCACACTATGTGGGGCTACTTCAGCCAAAGAACTGGCCTCTTGGTACATCTAGAAGACTCCCACCTACTCAGAATCAAATCCGCTGGAAACGATGGCGTATTCTGGGAAACCACCATGGAATCTGTGATACAAGATTATAGAAACGTAGATGGCATAAAGATAGCACACGCAGGGAAGAGTTGTGTGTCCTTGTTTAGGTTCGGGGAAGGACCTGAAAGCCATTCGAGGACGAGAATGGAAGAGGCTTGGGAGATTGAAGAAGTGGATTTCAACATCAAGGGATTGTCCATGGATTGCTTCTTGCCTCCTAGCGATCTCAAGAAAGAGGAGGAGAAAGGGGAACCCCACTGTGGACTGGTCCAAAGCAATCCCAAATTGCCGTTTAAGATTCGTTCGGCTTCTTTTAGGATTAGTACTTCTAAAGTGGCGGCAATTAACGTGGATGATTCAAGTTCCAGTGGTAGCGACGAAGAACTGTAA 1290 0.5062 MKKLCPNLDREDALETVLEVPVPEEIFTPKNGTARAWQNMVSWMKPNTDSRSSAALYGGRNTEIQLLLGVVGAPLIPFPINSESQTISRSIKDLHIEASMAKYIVKQYVAAVGGERPLNSIESMYAMGQVRMGASEFGAGEGNGNGVKKMAKVKKAQTSAEMGGFVVWQKRPALWCLELVVSGYKISAGSDGNVAWRQTPWHHSHASRGPPRPLRRFLQGLDPRSTANLFMNSICIDEKTLNNEDCFILKLEAESSALRARSSSNVEIIRHTMWGYFSQRTGLLVHLEDSHLLRIKSAGNDGVFWETTMESVIQDYRNVDGIKIAHAGKSCVSLFRFGEGPESHSRTRMEEAWEIEEVDFNIKGLSMDCFLPPSDLKKEEEKGEPHCGLVQSNPKLPFKIRSASFRISTSKVAAINVDDSSSSGSDEEL 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0884 429 PANTHER LIPASE 1 379 IPR006873 -
Lele27g0884 429 Pfam Protein of unknown function (DUF620) 124 373 IPR006873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0884 Lele-ChrLele27 16832001 16834161 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1194 25 7880872 7883036 Lele27g0884 27 16832001 16834161 CCT
Lele26g1192 26 7759642 7760603 Lele27g0884 27 16832001 16834161 CCT
Lele27g0892 27 16899624 16900574 Lele27g0884 27 16832001 16834161 CCT
Lele28g1184 28 7735073 7736031 Lele27g0884 27 16832001 16834161 CCT
Lele27g0884 27 16832001 16834161 Lele27g0884 27 16832001 16834161 ECH
Lele25g1194 25 7880872 7883036 Lele27g0884 27 16832001 16834161 hybridization
Lele26g1201 26 7832432 7835036 Lele27g0884 27 16832001 16834161 hybridization