Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0865 ATGGACGCAGCAGATCCTTCTCGAGCTTTCGTCAAGGACGTTAGGCGCATTGTCATCAAGGTTGGGACTGCTGTTGTGACCCGTAATGATGGAAGATTAGCAGTTGGAAAATTGGGGACGCTCTGTGAGCAGATTAAGGAGCTTAACTCTCTAGGATATGAGGTTATTTTGGTGTCATCTGGTGCTGTTGGCCTTGGTCGCCAAAGGCTTAGATACAGGAGATTACTTAACAGCAGCTTTGCTGATTTACAAAAGCCACATGTTGAACTTGATGGCAAAGCATGCGCAGCAGTTGGACAAAACAGTCTAATGGCCATATATGATGCTTTGTTCACTCAGCTTGATGTGACATCAGCTCAGCTTCTTGTGACAGACAATGATTTTAGAGATAGAGATTTCAGAAAGCAACTTACTGAAACTGTAAAATCTTTGTTAGCACTAAAAGTCATACCCATATTCAATGAAAACGACGCAGTCAGTACTAGGAAAGCTCCATATGAGGATTCTTCTGGTATATTTTGGGACAATGACAGTTTATCAGCTTTATTGGCCTTGGAATTAAAAGCTGATCTTCTTGTTCTGTTAAGTGATGTGGACGGTCTTTATACTGGCCCTCCAAGTGACCCAAGCTCAAGGCTTATTCATACATACCTCAAGGAAAAGCATCAGAATGAAATTACTTTTGGAGAGAAGTCCAGGGTGGGAAGAGGTGGAATGACTGCCAAGGTAAAGGCTGCTGTAAATGCAGCTGAAGCTGGCATTCCTGTTATTGTTACCAGTGGCTATGCACCTGAAAATATCCTTAAAGTCCTTCAAGGACATTGTATTGGAACCCTCTTCCATAAAGATGCTCATAAGTTGGTCCCAGTAAAAGAGGTATCAGCACGTGAAATGGCAGTTGCGGCTAGGGACTGCTCTAGACGGCTTCAGGCTTTATCTGAAGAAGAGAGGAAGCAAATTTTGCTAAATATAGCTGATGCACTGGAAGCAAATGAAAAAGAGATCAGGATTGAAAATGAGGCTGATGTCGCTGATGCACAACAAGCAAATCTTGATAAATCCTTGGTTGCTAGGTTGCTTCTAAAGCCTGGGAAGATTGGAAGCCTTGCAAAGAACATGAGAACTCTTGCAAACATGGAAGATCCAATTGGTCGAATATTAAAGCGAACTGAGGTAATTTGGCAAACCTGCTATGATCATCACCTAAAATGA 1212 0.4233 MDAADPSRAFVKDVRRIVIKVGTAVVTRNDGRLAVGKLGTLCEQIKELNSLGYEVILVSSGAVGLGRQRLRYRRLLNSSFADLQKPHVELDGKACAAVGQNSLMAIYDALFTQLDVTSAQLLVTDNDFRDRDFRKQLTETVKSLLALKVIPIFNENDAVSTRKAPYEDSSGIFWDNDSLSALLALELKADLLVLLSDVDGLYTGPPSDPSSRLIHTYLKEKHQNEITFGEKSRVGRGGMTAKVKAAVNAAEAGIPVIVTSGYAPENILKVLQGHCIGTLFHKDAHKLVPVKEVSAREMAVAARDCSRRLQALSEEERKQILLNIADALEANEKEIRIENEADVADAQQANLDKSLVARLLLKPGKIGSLAKNMRTLANMEDPIGRILKRTEVIWQTCYDHHLK 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0865 403 Gene3D - 5 285 IPR036393 -
Lele27g0865 403 SUPERFAMILY ALDH-like 296 392 IPR016161 GO:0016491
Lele27g0865 403 FunFam Delta-1-pyrroline-5-carboxylate synthase 4 287 - -
Lele27g0865 403 TIGRFAM proB: glutamate 5-kinase 15 289 IPR005715 GO:0005737|GO:0006561
Lele27g0865 403 Pfam Amino acid kinase family 16 260 IPR001048 -
Lele27g0865 403 ProSitePatterns Glutamate 5-kinase signature. 232 249 IPR019797 GO:0004349|GO:0006561
Lele27g0865 403 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 286 395 IPR016162 GO:0016491
Lele27g0865 403 PRINTS Glutamate 5-kinase family signature 175 202 IPR001057 GO:0005524|GO:0016301
Lele27g0865 403 PRINTS Glutamate 5-kinase family signature 96 124 IPR001057 GO:0005524|GO:0016301
Lele27g0865 403 PRINTS Glutamate 5-kinase family signature 136 157 IPR001057 GO:0005524|GO:0016301
Lele27g0865 403 PRINTS Glutamate 5-kinase family signature 234 254 IPR001057 GO:0005524|GO:0016301
Lele27g0865 403 PRINTS Glutamate 5-kinase family signature 52 66 IPR001057 GO:0005524|GO:0016301
Lele27g0865 403 Hamap Glutamate 5-kinase [proB]. 15 284 IPR005715 GO:0005737|GO:0006561
Lele27g0865 403 SUPERFAMILY Carbamate kinase-like 15 280 IPR036393 -
Lele27g0865 403 PANTHER GLUTAMATE SEMIALDEHYDE DEHYDROGENASE 1 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0865 Lele-ChrLele27 16671551 16675439 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g1231 26 8038920 8041368 Lele27g0865 27 16671551 16675439 CCT
Lele27g0862 27 16659890 16662680 Lele27g0865 27 16671551 16675439 CCT
Lele28g1224 28 8049182 8052679 Lele27g0865 27 16671551 16675439 CCT
Lele25g1213 25 8048935 8056093 Lele27g0865 27 16671551 16675439 CCT
Lele27g0865 27 16671551 16675439 Lele28g1222 28 8035421 8040302 ECH
Lele27g0865 27 16671551 16675439 Lele27g0865 27 16671551 16675439 ECH
Lele25g1213 25 8048935 8056093 Lele27g0865 27 16671551 16675439 hybridization
Lele26g1229 26 8025783 8034998 Lele27g0865 27 16671551 16675439 hybridization