Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0857 ATGGCTGGGATATGCTGTGGTGTTGTTGGAGAAGGTGAGACTCCGACTCCGATTGAGCCGGGGCGATCTTCTCGGCGCCGGAGGTTGGATATAATGCCCTTGAAGCTTATGGCTGACATGGCTGTGCAGCCGCCTGAGACCTGCAGCCTGAAGCGCCAAAAACTGGATCTCTTTACTAATTCTCCGACGCAACCAAGGGACTTCGTGAACGCAGTTGAGAATTGTGAATCTAGTGGTGTTAAGAAGGAAGAGGAACAAAACAAGGAGGAACAGAAAGTGGATGAAGTTCCGTCGACGGTTTCTTCGTTAAATTCAACTGATAAAAAAGAGTGTGATAATGAGGATATTCGTGAGTGTCCAAAGTTTGGGGTTACATCGGTTTGTGGTAGAAGGAGGGATATGGAAGATGCGGTTTCAGTTCGTCCGTCGTTCTGCCAAGAACAGGGTCAAAATCGGGAAGAGTTTCACTACTTCGGCGTGTTCGACGGCCACGGTTGCTCTCATGTAGCGACGATCTGTAAGGATAGATTGCATGAGATTGTAAAGGAAAAGGTCGGCGGAGCACGAGAGGATTTGGAATGGAAGTCTATGATGGAACAGAGTTTTGCTCGGATGGACGAGGAGGTGCAGAATTGGAGCCAGAGCAACCAGAGCTCCACTTGCAGGTGCGAGCTTCAGACGCCTCACTGCGACGCCGTCGGATCTACCGCGGTTGTTTCCGTTGTTACGCCAGACAAGATCATCGTCTCCAACTGTGGCGACTCCCGCGCCGTTCTCTGCCGAAACGGCGTGGCCGTCCCCCTTTCGTCCGATCACAAGCCCGACCGACCTGACGAGTTGCTGCGAGTTCAAGCCGCCGGAGGACGGGTCATTTACTGGGATGGTCCTAGGGTTCTCGGAGTTTTGGCAATGTCCAGAGCCATAGGCGACAATTATCTTAAACCATACGTTATATCGGAGCCGGAGGTGACGGTGACGGAGCGCACAGACGAGGACGAGTGTTTGATACTTGCGAGTGACGGCCTGTGGGACGTGGTGTCTAACGACACCGCATGTGGGGTGGTGCGGATGTGCCTGAAGGTGCAGAAACCGCCGTCACCGCCGGGATCCCCGGGAAGCGACATGGCAGCCGTGTGCTCCGCCGCTGATGGGTCGGATAAGTCATGCTCGGACGCATCCATTTTGCTGACGAAGCTAGCTTTGGCCCGGCACGGTACAGACAATGTGAGCGTGGTGGTAGTGGATTTGAGGAGAGAGAAACAACCAGAATGTGACTCCGACGAGGGGAACAATAATTAA 1299 0.535 MAGICCGVVGEGETPTPIEPGRSSRRRRLDIMPLKLMADMAVQPPETCSLKRQKLDLFTNSPTQPRDFVNAVENCESSGVKKEEEQNKEEQKVDEVPSTVSSLNSTDKKECDNEDIRECPKFGVTSVCGRRRDMEDAVSVRPSFCQEQGQNREEFHYFGVFDGHGCSHVATICKDRLHEIVKEKVGGAREDLEWKSMMEQSFARMDEEVQNWSQSNQSSTCRCELQTPHCDAVGSTAVVSVVTPDKIIVSNCGDSRAVLCRNGVAVPLSSDHKPDRPDELLRVQAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERTDEDECLILASDGLWDVVSNDTACGVVRMCLKVQKPPSPPGSPGSDMAAVCSAADGSDKSCSDASILLTKLALARHGTDNVSVVVVDLRREKQPECDSDEGNNN 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0857 432 MobiDBLite consensus disorder prediction 78 109 - -
Lele27g0857 432 PANTHER PROTEIN PHOSPHATASE 95 416 - -
Lele27g0857 432 SMART PP2C_4 109 414 IPR001932 -
Lele27g0857 432 CDD PP2Cc 121 416 IPR001932 -
Lele27g0857 432 FunFam Protein phosphatase 2C 37 116 423 - -
Lele27g0857 432 Gene3D - 116 425 IPR036457 -
Lele27g0857 432 ProSiteProfiles PPM-type phosphatase domain profile. 121 416 IPR001932 -
Lele27g0857 432 Pfam Protein phosphatase 2C 122 363 IPR001932 -
Lele27g0857 432 SUPERFAMILY PP2C-like 121 417 IPR036457 -
Lele27g0857 432 SMART PP2C_SIG_2 133 416 IPR001932 -
Lele27g0857 432 ProSitePatterns PPM-type phosphatase domain signature. 157 165 IPR000222 GO:0043169
Lele27g0857 432 MobiDBLite consensus disorder prediction 78 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0857 Lele-ChrLele27 16594540 16596243 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0857 108 421 PP2C-type Phosphatase Gene Family AT1G07430 63.664 7.30e-147 423