Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0853 ATGTGGCATCTTGTGAAGCCGCCACCAAATCGACATTCTCGCCCTTGGTTTCACAGATTGGGCATGATTTATGGGCTTAACCGAGGGATCGAGGGGCAATGCCAAGGGGATCATGGGAAAAAGCTTGATCTATCTTTGTATGCGGAAAACTGGGCTAGTCTAATTCTGTCACCTGCAAATCTACAAGCTGGTATCAATGCGATAGAGGAGGAACCTGAGGAATATGATGATACATATCCTAACAAAACTACTTTAGCATGCATGATCAATTCTGAAATTGGTGCTGTTATGGCAGTCATGCGAAGAAATGTTAGATGGGGAGGCCGTTATATGTCTGGCGATGATCAGCTGGAGCACTCCCTTATTCAATCTCTGAAGACTTTGAAGAGGCAAATGTTTTCATGGCAACATCAGTGGCATGCTATCAACCCGGCCTTGTATCTCCAGCCTTTTCTGGATGTAATTCGATCAGATGAAACTGGTGCGCCAAGTACCAGTGTTGCTTTGTCATCTGTTTATAAGATCTTAACTCTTGATGTGATTGATCAAAACACTGTCAATGTTGAGGATGCCATGCACCTGGTGGTTGATTCTGTCACTAGCTGCAGATTTGAGGTGACTGATCCTGCATCAGAAGAAGTGGTTTTAATGAAGATACTACAAGTTTTTGTTGCATGTATGAAAAGTAAAGCATCTGTAATGTTAAGTAACCAACATGTTTGCACCTTAGTGAATACTTGTTATCGAATAGTTCATCAAGCTGGAGCAAAAAGTGAGTTATTGCAGCGGATAGCACGCCACACAATGCATGAACTTATTAGGCGTATTTTCTCGCATCTTCAAGATGTTGGCAACACAGAGCATGCATTGGTAAATGGAGGCTCTACTTTAAAACAAGAGGTTGGAGGGTTAAATAATGAGTTTGCTTTTGGAAGTAAACAATTAGAGAATGGAAGCATGAATTCTGAATATGATAATCAGTCATTACCCACGGACTCTGCTCCCAGTGCTGCAACTGTGATTGATGAAAACACCGCTATTGCTAGTAATGGCAAGGGGAATGTACCTTATGAGATGCATCTTATGACTGAGCCATATGGAGTTCCCTGCATGGTGGAAATATTTCATTTCCTGTGTTCTTTGCTGAATACTGAGAACGTGGATATGGGTCCTAGATCAAATACAATAGCCTTTGATGAAGATGTGTCCCTTTTTGCCTTAAATTTAATTAATGCTGCTATAGAATTGGGAGGGCCTTCCATTCGCCGACACCCCAGATTGCTGAGCTTAGTTCAGGATGAATTGTTCCGTAGTCTGATGCAGTTTGGTTTATCTACAAGTCCTCTTATACTTTCAATGGTGTGTAGCATCGTTCTCAACTTGTATCATCATCTTCGAGCTGAACTCAAATTGCAGCTTGAAGCATTTTTTTCTTGTGTCATTTTGAGGCTTGCACAAAGCAGATATGGCGCTTCATACCAGCAGCAAGAGGTTGCCATGGAGGCTGTTGTTGACTTCTGCGGGCAAAAAACATTTATGGTAGATATGTATGCTAACTTTGACTGTGACATTACTTGCAGTAATGTCTTTGAAGACCTTGCTAATTTGTTGTCAAAAAGTGCATTTCCTGTAAACTGCCCTTTGTCTTCTATGCATATTCTTGCTTTAGATGGTCTCATTGCCGTTATACAAGGAATGGCTGAACGGATTGCCAATGGATCTAATATTTCAGAACATTCACCTGTGAGTCTTGAAGAGTATACTCCATTTTGGATGGTTAAGTGTGAGAATTACAATGATCCAAATCATTGGGTCCCTTTTGTCCGTCGAAGGAAGTACATGAAGAGAAGATTGATGATTGGAGCTGACCACTTTAATCGTGACCCTAAGAAAGGTCTTGAGTTTCTACAAGGAACACATCTTTTGCCTGACAAACTTGATCCCCAAAGTGTTGCTTGCTTTTTCAGGTACACTGCCGGGCTGGATAAGAATCTTGTTGGTGATTTCCTAGGAAATCATGATGAATTTTGTGTTCAGGTTCTTCATAAATTTGCTGGAACATTTGATTTCCAAGATATGAATATAGACACTGCTCTGCGACTCTTTCTCGAGACATTCAGACTACCAGGAGAATCACAAAAGATACAAAGGGTGCTTGAAGCCTTTTCCGAAAGATACTATGAGCTGTCACCACATATTCTTGCTAACAAGGATGCAGCCCTTGTATTGTCATATTCACTCATATTGCTGAATACAGATCAGCATAATGTACAGGTTAAAAAGAAGATGACAGAAGAGGATTTTATTCGTAATAATAGGCATATAAATGGTGGCAATGATCTGCCTCGAGAGTTCCTATCGGAGCTTTATCATTCAATTTGTAAGAATGAGATCCGCACTACCCCTGATCAAGGTGCTGGATTTCCTGAAATGACTCCAAGTCGGTGGATTGATCTGCTGCACAAATCAAAGAAAACTGCTCCATTTATTGTATCTGATTCCAGAGCCTACCTTGATCATGATATGTTTGCTATAATGTCAGGCCCAACAATTGCTGCCATATCTGTGGTATTTGATCATGCTGAACATGAAGAGGTATATCAAACTTGTATGGATGGATTCTTAGCTGTTGCTAAAATTTCAGCTTGCCATCATCTTGAAGATGTTCTGGATGATCTGGTTGTGTCTCTTTGTAAGTTCACTACTCTTTTGAACCCATCATCAGTAGAGGAACCAGTCCTAGCCTTCGGAGATGACACAAAAGCAAGAATGGCAACTGTAACTGTTTTTAGTATTGCTAATAGGTATGGGGATTACATCCGCACTGGATGGAGAAATATACTTGATTGTATCTTAAGATTACACAAGTTAGGACTTCTTCCTGCCCGTGTAGCCAGTGATGCAGCTGATGAGTCGGAGCTTTCTACTGAGACTGGGCACGGGAAGCCTATAACAAATTCTTTGTCATCAGCTCATATGCCATCCATTGGTACTCCGAGGAGATCCTCAGGATTGATGGGGAGGTTTAGTCAGCTCTTGTCTCTTGAAACTGAAGAGCCAAGGTCACAACCTACTGAACAACAACTTGCTGCTCATCAGCGAACCCTACAAACAATACAGAAATGTCACATTGACAGCATATTCACTGAAAGTAAATTTTTGCAAGCTGAATCGCTATTGCAACTTGCAAGAGCGCTTATTTGGGCAGCAGGGTTTCCTCAAAAAGGGAGCAGCACACCTGAGGATGAAGATACTGCTGTGTTCTGCCTAGAGTTGTTGATTGCAATCACTTTGAATAATAGGGATAGAATTGGAATACTTTGGCAGGGTGTGTATGAGCATATTTCCAATATTGTTCAGTCAACTGTAATGCCTTGTGCACTGGTAGAGAAGGCTGTTTTTGGACTTCTAAAGATTTGCCAGCGGTTGCTTCCATACAAGGAGAGCATTGCTGATGAACTTCTGAGGTCCCTGCAGCTAGTCTTGAAGCTTGATGCTCGAGTTGCCGATGCATACTGTGAGCAGATTACACAGGAAGTCAATCGCCTGGTGAAGGCAAATGCTTCCCATATTAGATCACAGTTAGGATGGCGTACAATTACGTCACTACTTTCCATCACAGCAAAGCACCTAGAAGCATCTGAGGTTGGGTTTGAGGCACTATTGTTCATAATGTCAGATGGAGCCCACTTGCTAGCAGCTAATTATGTTCTCTGTGTAGAAGCTGCTAGGCACTTTGCTGAATCTCGAGTTGGACAGGCAGAGCGATCAGTACGGGCACTGGATCTCATGGCAGGGTCTGTTGATTGCTTAGTTCAGTGGACTAGTGAGGCTAGGCAGACAATGGGGGAGGAGGAAGTGTCAAAATTGTCTCACGACATTGGAGAGATGTGGTTAAGGCTAGTGCAGGGACTAAAGAGAGTATGTTTAGACCAGAGAGAGGAGGTTAGAAACCATGCTATATTATCACTGCAGAAGTGCTTGACGGGAGTTGATGGGATTTATCTCTCGCATAGTGTGTGGTTACAGTGTTTTGATCTGGTCATCTTCACTGTGCTTGATGATCTGCTTGAAATTGCACAAGGACAGTCTCAAAAGGATTACCGCAACATGGAAGGCACCCTCATCTTTGCCATGAAGCTCTTGTCCAAAGTATATCTTCAGTTAGTCCAAGACCTATCACAGTTGTCAACATTTTGCAAACTATGGTTGGGGCTGCTGAGCCGAATGGAAAAATATATGAAAGTGAAAGTTAGGGGGAAAAAGAGTGAGAAGCTTCAAGAGCTAGTGCCTGAGCTTCTAAAAAATACGTTACTCGTTATGAAGACGAGGGGCATTCTGGTTCAGAGGAGTGCCTTGGGTGGTGATAGTTTATGGGAATTGACATGGCTACATCTGAATAACATTGCTCCATCACTGCAATCTGAGGTGTATCCTGAGCAGGATTCTGAGCATTCGCAACACGAAAAGGGTGGATCAAATGAAGGTTTGAACCCTGATGAAACGGGTTCTGTTAGCCCCAATGACACAGCCAAACGTGAAGATTCTGCCGTTGTCGGTTAA 4563 0.4234 MWHLVKPPPNRHSRPWFHRLGMIYGLNRGIEGQCQGDHGKKLDLSLYAENWASLILSPANLQAGINAIEEEPEEYDDTYPNKTTLACMINSEIGAVMAVMRRNVRWGGRYMSGDDQLEHSLIQSLKTLKRQMFSWQHQWHAINPALYLQPFLDVIRSDETGAPSTSVALSSVYKILTLDVIDQNTVNVEDAMHLVVDSVTSCRFEVTDPASEEVVLMKILQVFVACMKSKASVMLSNQHVCTLVNTCYRIVHQAGAKSELLQRIARHTMHELIRRIFSHLQDVGNTEHALVNGGSTLKQEVGGLNNEFAFGSKQLENGSMNSEYDNQSLPTDSAPSAATVIDENTAIASNGKGNVPYEMHLMTEPYGVPCMVEIFHFLCSLLNTENVDMGPRSNTIAFDEDVSLFALNLINAAIELGGPSIRRHPRLLSLVQDELFRSLMQFGLSTSPLILSMVCSIVLNLYHHLRAELKLQLEAFFSCVILRLAQSRYGASYQQQEVAMEAVVDFCGQKTFMVDMYANFDCDITCSNVFEDLANLLSKSAFPVNCPLSSMHILALDGLIAVIQGMAERIANGSNISEHSPVSLEEYTPFWMVKCENYNDPNHWVPFVRRRKYMKRRLMIGADHFNRDPKKGLEFLQGTHLLPDKLDPQSVACFFRYTAGLDKNLVGDFLGNHDEFCVQVLHKFAGTFDFQDMNIDTALRLFLETFRLPGESQKIQRVLEAFSERYYELSPHILANKDAALVLSYSLILLNTDQHNVQVKKKMTEEDFIRNNRHINGGNDLPREFLSELYHSICKNEIRTTPDQGAGFPEMTPSRWIDLLHKSKKTAPFIVSDSRAYLDHDMFAIMSGPTIAAISVVFDHAEHEEVYQTCMDGFLAVAKISACHHLEDVLDDLVVSLCKFTTLLNPSSVEEPVLAFGDDTKARMATVTVFSIANRYGDYIRTGWRNILDCILRLHKLGLLPARVASDAADESELSTETGHGKPITNSLSSAHMPSIGTPRRSSGLMGRFSQLLSLETEEPRSQPTEQQLAAHQRTLQTIQKCHIDSIFTESKFLQAESLLQLARALIWAAGFPQKGSSTPEDEDTAVFCLELLIAITLNNRDRIGILWQGVYEHISNIVQSTVMPCALVEKAVFGLLKICQRLLPYKESIADELLRSLQLVLKLDARVADAYCEQITQEVNRLVKANASHIRSQLGWRTITSLLSITAKHLEASEVGFEALLFIMSDGAHLLAANYVLCVEAARHFAESRVGQAERSVRALDLMAGSVDCLVQWTSEARQTMGEEEVSKLSHDIGEMWLRLVQGLKRVCLDQREEVRNHAILSLQKCLTGVDGIYLSHSVWLQCFDLVIFTVLDDLLEIAQGQSQKDYRNMEGTLIFAMKLLSKVYLQLVQDLSQLSTFCKLWLGLLSRMEKYMKVKVRGKKSEKLQELVPELLKNTLLVMKTRGILVQRSALGGDSLWELTWLHLNNIAPSLQSEVYPEQDSEHSQHEKGGSNEGLNPDETGSVSPNDTAKREDSAVVG 1520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0853 1520 MobiDBLite consensus disorder prediction 970 1004 - -
Lele27g0853 1520 SUPERFAMILY ARM repeat 371 1411 IPR016024 -
Lele27g0853 1520 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 369 529 IPR032691 -
Lele27g0853 1520 SMART sec7_5 611 798 IPR000904 GO:0005085|GO:0032012
Lele27g0853 1520 MobiDBLite consensus disorder prediction 1481 1495 - -
Lele27g0853 1520 MobiDBLite consensus disorder prediction 1497 1511 - -
Lele27g0853 1520 Gene3D - 608 690 - -
Lele27g0853 1520 ProSiteProfiles SEC7 domain profile. 607 796 IPR000904 GO:0005085|GO:0032012
Lele27g0853 1520 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 124 1482 - -
Lele27g0853 1520 FunFam ARF guanine-nucleotide exchange factor GNOM-like 690 808 - -
Lele27g0853 1520 FunFam ARF guanine-nucleotide exchange factor GNOM 608 690 - -
Lele27g0853 1520 Gene3D - 691 808 IPR023394 -
Lele27g0853 1520 MobiDBLite consensus disorder prediction 1476 1520 - -
Lele27g0853 1520 CDD Sec7 614 798 IPR000904 GO:0005085|GO:0032012
Lele27g0853 1520 SUPERFAMILY Sec7 domain 612 804 IPR035999 GO:0005085|GO:0032012
Lele27g0853 1520 Pfam Sec7 domain 615 798 IPR000904 GO:0005085|GO:0032012
Lele27g0853 1520 MobiDBLite consensus disorder prediction 978 997 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0853 Lele-ChrLele27 16562536 16569924 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1213 25 8048935 8056093 Lele27g0853 27 16562536 16569924 CCT