Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0849 ATGGCGAATCGGTGGTGGGCTGGTAACGTGGCAATGAGACCTAATAAAGATCCCTTGTTGTCTTCTCCATCGCTACATCTGAGAAACCCAGAAGACGACCATGGCGGATTCAATCGACTCGGGCCAAGACGGGAGCAAGATTTTCTGGAAAACACTTATAACAACACGACTCCAACCAATAGCAGCAATAGCAACACTAACGCCAACACAAACACAACCTCGCAGAGCCAGAACGTCGTCGACGATGACGATAGCCGACACAACAGTAGCCGCGAAGCAGATGATCAAAACCCAGGTAGCCATGACGGTGCCGCCGAGCCGGGAAGCAGCAGCGGCCGACGTCCCCGAGGCCGCCCGCCCGGGTCGAAGAACAAGTCGAAGGCACCGTTGGTTGTGACAAAGGAGAGTCCTAATGCCCTCCGGAGCCACGTGTTGGAAATCTCCAGCGGCAGCGATGTTGCCGAGAGCCTCTCCGCCTTCGCGAACCGGAGACACCGCGGGATGTCAGTTCTCAGCGGAAGTGGCATTGTAACCGATGTCACTCTCCGGCATCCGGCGGCGCCAGGTGGGGTTATCACACTAAATGGAAGGTTCGAGATCCTGTCACTATCTGGGGCGTTTTTGGCGGCCCCTTCGCCGGCTGGAGCCACGGGGCTAACGGTGTATCTCGCCGGCGGACAAGGGCAAGTTGTTGGCGGAAATGTGGTGGGTTCATTGGTAGCATCAGGGCCTGTATTGGTGATTGCAGCGACATTTGCTAATGCCACCTACGAGAGATTGCCACTTGAAGATGAACCATCTGGGGAAGATAATGTTGAAGTACAAGCACATCAACAATCAGGAGTAAATTCAACAACTTCTGGGCCTTCTTCAACATCTCAAGCTCTGAATGAACAAGTTTCAATGCCTATGTTCAATAACATGCCACCAAATGTGATACAACCATGTAATGTTCAAATGCCACATGATGTGTTCTGGGCGCCTCCTGCTCGCCAACCTCCTTACTGA 1008 0.5337 MANRWWAGNVAMRPNKDPLLSSPSLHLRNPEDDHGGFNRLGPRREQDFLENTYNNTTPTNSSNSNTNANTNTTSQSQNVVDDDDSRHNSSREADDQNPGSHDGAAEPGSSSGRRPRGRPPGSKNKSKAPLVVTKESPNALRSHVLEISSGSDVAESLSAFANRRHRGMSVLSGSGIVTDVTLRHPAAPGGVITLNGRFEILSLSGAFLAAPSPAGATGLTVYLAGGQGQVVGGNVVGSLVASGPVLVIAATFANATYERLPLEDEPSGEDNVEVQAHQQSGVNSTTSGPSSTSQALNEQVSMPMFNNMPPNVIQPCNVQMPHDVFWAPPARQPPY 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0849 335 Gene3D - 140 279 - -
Lele27g0849 335 ProSiteProfiles PPC domain profile profile. 137 275 IPR005175 -
Lele27g0849 335 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 69 327 IPR014476 GO:0003680
Lele27g0849 335 FunFam AT-hook motif nuclear-localized protein 140 267 - -
Lele27g0849 335 MobiDBLite consensus disorder prediction 1 131 - -
Lele27g0849 335 MobiDBLite consensus disorder prediction 48 79 - -
Lele27g0849 335 MobiDBLite consensus disorder prediction 80 99 - -
Lele27g0849 335 Pfam Plants and Prokaryotes Conserved (PCC) domain 141 253 IPR005175 -
Lele27g0849 335 CDD DUF296 141 224 IPR005175 -
Lele27g0849 335 SUPERFAMILY AF0104/ALDC/Ptd012-like 137 265 - -
Lele27g0849 335 MobiDBLite consensus disorder prediction 27 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0849 Lele-ChrLele27 16535803 16536810 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0849 1 334 AT-hook Motif Nuclear Localized (AHL) Family AT3G55560 51.143 5.79e-74 229