Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0847 ATGCAAAAGTACAAGGTTAGGACAGCGACAGGACTCGGCTCTTCATGTGGAGCATGCAAGTTCCTCCGCAGAAAGTGTACTGCCGATTGCATATTTGCTCCTTACTTCTCCTATGACCAGGCTCCTACCCATTTTGCTGCAGTGCACAAGGTTTTTGGCGCTAGTAACGTCTCTCGGCTACTGCTACACCTACCGGTGCAGACTAGAAGCGATGCAGCCATCACCGTGTCTTATGAGGCACTCGCTCGGATGCATGATCCTGTATATGGTTGTGTTGCTCAAATCTTTGCCCTGCAGCAACAGGTTGCAAGCTTGCAAGAGGAAATAGATAAACTTGGTAATACGATGGCCAACTCTCCTGTTGGGGCTGCCATTTCCAGTGGCAGTTCTCAAGCCTCGACAAGAAGAAACAAAGATGGGATAGATTTTTCATGGCAGCAAGATGCAATAAATACACAACTTTATCATACTCAACTATCTACTCTGCTTCCTCACCAAGGAAGTGCTACAGCCTACCAAGGCTTGGAAGGACAGGTTGATTTGGATTTTCCAGTTGCTCTTCAATTCGAAGACCGCGTATTTGATGAGTCCGACCTTAATTCATTAGAGAAGCTCCTATCAGGAATTGACCAACAGGTTTTCATCAATCATCCTTGA 657 0.4627 MQKYKVRTATGLGSSCGACKFLRRKCTADCIFAPYFSYDQAPTHFAAVHKVFGASNVSRLLLHLPVQTRSDAAITVSYEALARMHDPVYGCVAQIFALQQQVASLQEEIDKLGNTMANSPVGAAISSGSSQASTRRNKDGIDFSWQQDAINTQLYHTQLSTLLPHQGSATAYQGLEGQVDLDFPVALQFEDRVFDESDLNSLEKLLSGIDQQVFINHP 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0847 218 PANTHER LOB DOMAIN CONTAINING PROTEIN 11 150 - -
Lele27g0847 218 ProSiteProfiles LOB domain profile. 14 116 IPR004883 -
Lele27g0847 218 Coils Coil 95 115 - -
Lele27g0847 218 Pfam Lateral organ boundaries (LOB) domain 15 111 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0847 Lele-ChrLele27 16512660 16513390 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0847 13 118 AS2 family AT5G06080 75.472 6.34e-57 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele27g0847 LOB 1.9e-35 No_clan