Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0835 ATGACCTTACGAGGTTTCCAAACCATGGGCGATGCTATTGATTTGACTGGTGATGGAGGTGTCGTAAAGACCATTGTGAAAAGAAGCAAAGTTGATGCTGTGGGTCCTATTGAAGATTTTCCCCTTGTTGATGTTCATTATGAAGGAACACTTGCTGATACTGGTGAAGTATTTGATACCACACATGAGGATAACACAGTGTTCACTTTTGAGCTTGGAAAGGGCAGTGTTATCAAGGCTTGGGAAATTGCAGTGAAGACCATGAAGGTTGGAGAAATTGCAAAAATTACTTGCAAGCCAGAATATGCATATGGCAGTGCAGGATCTCCACCAGATATCCCCCCAGATGCGACACTTGTTTTTGAAGTTGAGCTAGTTGCTTGTAAGCCTCGGAAGGGTTCCAGTCTGGGAAGTGTTTCAGACGAGAGGGCCAGGCTAGAAGAGCTGAAGAAGCAAAGAGAGATTGCTGCAGCTGCCAAAGAGGAGGAGAAAAGGAAGAGAGAGGAAGCAAAAGCTGCAGCTGCTGCTCGTGTGCAAGCCAAGTTAGAGGCCAAAAAAGGTCAGGGAAAGGGTAAATCCAAAGCAAAGTAG 591 0.4552 MTLRGFQTMGDAIDLTGDGGVVKTIVKRSKVDAVGPIEDFPLVDVHYEGTLADTGEVFDTTHEDNTVFTFELGKGSVIKAWEIAVKTMKVGEIAKITCKPEYAYGSAGSPPDIPPDATLVFEVELVACKPRKGSSLGSVSDERARLEELKKQREIAAAAKEEEKRKREEAKAAAAARVQAKLEAKKGQGKGKSKAK 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0835 196 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 42 126 IPR001179 GO:0003755
Lele27g0835 196 Gene3D - 7 128 IPR046357 GO:0003755
Lele27g0835 196 SUPERFAMILY FKBP-like 16 132 - -
Lele27g0835 196 FunFam Peptidylprolyl isomerase 9 128 - -
Lele27g0835 196 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 40 129 IPR001179 GO:0003755
Lele27g0835 196 MobiDBLite consensus disorder prediction 157 174 - -
Lele27g0835 196 Coils Coil 139 178 - -
Lele27g0835 196 MobiDBLite consensus disorder prediction 157 196 - -
Lele27g0835 196 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 12 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0835 Lele-ChrLele27 16413056 16415194 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0835 13 163 Calmodulin-binding Proteins AT5G48570 33.333 4.10e-12 62.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele27g0835 27 16413056 16415194 Lele27g0835 27 16413056 16415194 ECH
Lele25g1247 25 8301775 8304358 Lele27g0835 27 16413056 16415194 hybridization
Lele26g1261 26 8254703 8257257 Lele27g0835 27 16413056 16415194 hybridization