Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0831 ATGGTGTGCAAGAAGAGGCTAGAATATGGATTCAATGGCTTTCAGGTCCCCTTTATTCCTAGAGCTCCTAGATCTGTAAGAAGGAGGTTTCTTTCCAAGAAAGAAGAGGACGGTCAATTTTGTGCCATTGAAGTACTGGCATCTTTAGCTGGCAAGTTGTTGCAGGAGAGTGAAAGTTCAGCTTCTAGCAATGCATCGGAAGGAAATCACCAGCCGGCCTGTGGCCAAGGCACTGTTGATCAGGAAAGTCAAGGTGAAGCCAAACCATTAGTAGCAGAAGGTGTTCATCATGGAAGTTGTGCAGAGAGTGCCTTTATGACTGAGGTAGTCTCACGAAATTCTAGCCCGAAGTATCTTGGGCAAGCTGAGGCTGATGCCGTACCAGAATGCACTTCCATTACTAATCCTGCTGATTGCTGCAAGAAAATAGAACCTAACATTAAGCCTGAAATATGCAAATGGGAGGATCAAGTTGGACATTATTCTAGTAGTAGTTTAGCAGAAGCACCCCGAAATTTTAGAGAGTCTTATAATAATAGTAATATAAACAATGGCTTTAAAAGGGAACAAGAAGCTGGGAGTTCAGGCATTGAGGGATCAAGTCTTGCTGATAAATGTAGTTTGAAGGATCCTTTGGAGTATCGAGTTAACTCTCATGCAATAAGTAACTCAGTTAGTAAAATTAAATATCCATTCTCTAAAGGAACTTTTCCAAATAGTTCCTTTTCTAATTATGGCAATAATAGTAAGGTAGGTTTTAGAGATGATGACGAAAACTTTATCAGGTGCAACAAAATTAGCACCAAATCAAAGGCTTTTAAGCCTCCGCATCAGATTTCACACCGAAGAATCAGAAAGCTCGTGACTTCCAAATACTGGAAGGTTGCTCCGAAGTTGAAAGATTGCGAGCCTTCCAGATCTGATGCTGGAGCAAAGCCTCTTTTTCAGAAGAGGAAGGCTTGTCACAGTTTTGAAAGAGGTCATTATGATACTCTTTCCAAGAGGAGGAAATTCTCTAATCGGTGTTCAGGCCTGACGCTTGATGGAGGATTCAGCAGTGAGAGTGTATCTAATTCACTTGAGAAAGGAATGGATGGCTACAACCCTAGCTCATCCTCAGAACAACATGAATCAAAGGATTCTCATGTGAAGTTTAGCATTAAGTCTTTCAAGATACCAGAGCTTTATATTGAGGTTCCTGAAACTGCTACCGTTGGTTCTCTAAAGAGGACAGTCATGGAGGCTGTGATGGCTATACTTGGGGGTGGAGTGCATGTTGGTGTTGTTCTTCAGGGGAAGAAAGTTAGAGATGACAACAGAACTCTTGAGCAGACTGGTTTATCTTGTGAAGACAATATCGATACCATAGATTTCACGTTGGAGCCAAGTTCCTTACAAGGCTCTCCTGTCTGTATTGGTGATCCTTCTCATCACGAACCATCCCATTCGATCAGGTCCCCTAGAACTCCTGTCTTAGATTCAGGGATTACTGATGTCTTACATGACTCTCCCTTGCTGACTACTCCGAGCAAAGCTATCGAAAGTAACCATGAATCAACTTCTTCTCCCACTGACAAAGTAGAGCCAGATTCCAAATCTTTAGTAGTTGTTCCTGATAAGAGCACAGAACCCTTGGCTGTAGTTCCAGTGACTCAGAAAACTAAGCGCTCTGAGCTTGTACAGCGTCGAACCAGGAGACCCTTCTCAGTGTCTGAGGTAGAAGCACTTGTTCAGGCTGTTGAAGAACTTGGAACTGGAAGGTGGCGTGACGTTAAGCTGCTTGCTTTTGATAATGCAGACCATAGGACTTATGTTGACTTGAAGGACAAATGGAAAACGTTAGTACACACAGCAAGAATATCTCCCCAACAAAGAAGAGGAGAGCCAGTACCTCAGGAGCTGTTGGACAGAGTGTTGGCTGCTCATGCTTTCTGGTCACAGCATCAAGGCAAGCAGCAACAACATGGGAAGCATCATCATCAACAACCTCCAGGAACTCCGAACAAAGTCAGAGAATCCTCAGCTCCTCAATGTCTCAGTCTTGTTGCTGGTGAAGCTGGTGGTGGTGTCATCCAGCCCATTGGAACAATGTAA 2094 0.4341 MVCKKRLEYGFNGFQVPFIPRAPRSVRRRFLSKKEEDGQFCAIEVLASLAGKLLQESESSASSNASEGNHQPACGQGTVDQESQGEAKPLVAEGVHHGSCAESAFMTEVVSRNSSPKYLGQAEADAVPECTSITNPADCCKKIEPNIKPEICKWEDQVGHYSSSSLAEAPRNFRESYNNSNINNGFKREQEAGSSGIEGSSLADKCSLKDPLEYRVNSHAISNSVSKIKYPFSKGTFPNSSFSNYGNNSKVGFRDDDENFIRCNKISTKSKAFKPPHQISHRRIRKLVTSKYWKVAPKLKDCEPSRSDAGAKPLFQKRKACHSFERGHYDTLSKRRKFSNRCSGLTLDGGFSSESVSNSLEKGMDGYNPSSSSEQHESKDSHVKFSIKSFKIPELYIEVPETATVGSLKRTVMEAVMAILGGGVHVGVVLQGKKVRDDNRTLEQTGLSCEDNIDTIDFTLEPSSLQGSPVCIGDPSHHEPSHSIRSPRTPVLDSGITDVLHDSPLLTTPSKAIESNHESTSSPTDKVEPDSKSLVVVPDKSTEPLAVVPVTQKTKRSELVQRRTRRPFSVSEVEALVQAVEELGTGRWRDVKLLAFDNADHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLAAHAFWSQHQGKQQQHGKHHHQQPPGTPNKVRESSAPQCLSLVAGEAGGGVIQPIGTM 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0831 697 ProSiteProfiles Myb-like domain profile. 560 615 IPR001005 -
Lele27g0831 697 SUPERFAMILY Ubiquitin-like 377 456 IPR029071 -
Lele27g0831 697 SMART sant 564 617 IPR001005 -
Lele27g0831 697 MobiDBLite consensus disorder prediction 58 83 - -
Lele27g0831 697 MobiDBLite consensus disorder prediction 507 528 - -
Lele27g0831 697 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 654 IPR031105 -
Lele27g0831 697 MobiDBLite consensus disorder prediction 464 489 - -
Lele27g0831 697 Gene3D - 553 657 - -
Lele27g0831 697 MobiDBLite consensus disorder prediction 646 675 - -
Lele27g0831 697 MobiDBLite consensus disorder prediction 58 85 - -
Lele27g0831 697 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 561 619 IPR017930 -
Lele27g0831 697 SUPERFAMILY Homeodomain-like 566 647 IPR009057 -
Lele27g0831 697 MobiDBLite consensus disorder prediction 507 532 - -
Lele27g0831 697 MobiDBLite consensus disorder prediction 356 380 - -
Lele27g0831 697 CDD SANT_TRF 566 616 - -
Lele27g0831 697 MobiDBLite consensus disorder prediction 182 201 - -
Lele27g0831 697 MobiDBLite consensus disorder prediction 356 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0831 Lele-ChrLele27 16347726 16351111 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele27g0831 27 16347726 16351111 Lele28g1256 28 8351355 8354864 ECH
Lele41g0048 41 350904 354512 Lele27g0831 27 16347726 16351111 ECH
Lele42g0048 42 375503 378796 Lele27g0831 27 16347726 16351111 ECH
Lele43g1311 43 21239927 21244822 Lele27g0831 27 16347726 16351111 ECH
Lele44g1303 44 21293703 21300749 Lele27g0831 27 16347726 16351111 ECH
Lele27g0831 27 16347726 16351111 Lele27g0831 27 16347726 16351111 ECH
Lele25g1252 25 8364994 8368405 Lele27g0831 27 16347726 16351111 hybridization
Lele26g1264 26 8317193 8320701 Lele27g0831 27 16347726 16351111 hybridization