Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0829 ATGCGGCCAAAGAAACACATTCTCACTCTCTGCAATCCCCAAGAGCTACCATTGACCCCAATGGCTTTCCCCACTCTCTTCGCCATTGCTTCCCTGATCGCTTCTCTGACCCTCACCAACGCTAAAGTTCCCGGCGTCTACTCCGGCGGAGAATGGCAGAACGCCCACGCTACTTTCTACGGCGGCAGCGATGCCTCCGGCACCATGGGAGGGGCGTGTGGGTATGGGAACTTGTATAGCCAAGGGTATGGAGTGAACACGGCGGCGCTGAGCACTGCTCTGTTCAACAATGGCTTGAGCTGCGGGGTTTGTTTCGAGATCAAGTGTGGTAGCGATCCACAATGGTGCCATCCCGGCAGCCCGTCGATCTTCATTACGGCCACTAACTTTTGCCCACCGAACTTCGCTCTTCCCAATGATAACGGCGGCTGGTGCAACCCCCCACGGCCACATTTCGACCTCGCCATGCCCATGTTCCTCAAGATCGCCGAGTACCGCGCCGGCATCGTCCCTGTCTCTTACCGCAGGGTACCTTGCCGGAAAGCCGGAGGGATAAGGTTTACGATAAACGGATTCAAATACTTCAACCTGGTTCTGATAAGTAACGTCGCCGGAGCAGGGGATCTCGTGAGGGTGAGCGTGAAGGGGTCGAAGACGGAGTGGATGAGCATGAGCCGGAATTGGGGTCAGAACTGGCAATCCAACGCCGTTCTGGTTGGTCAGTCACTGTCCTTCAGGGTCACCGGCAGCGACCGCCGTACCTCCACCTCCTGGAACATCGTCCCTTCCAACTGGCAATTCGGTCAAACTTTCACCGGAAAGAACTTCAGGGTCTGA 837 0.5663 MRPKKHILTLCNPQELPLTPMAFPTLFAIASLIASLTLTNAKVPGVYSGGEWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGVCFEIKCGSDPQWCHPGSPSIFITATNFCPPNFALPNDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKAGGIRFTINGFKYFNLVLISNVAGAGDLVRVSVKGSKTEWMSMSRNWGQNWQSNAVLVGQSLSFRVTGSDRRTSTSWNIVPSNWQFGQTFTGKNFRV 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0829 278 SUPERFAMILY PHL pollen allergen 182 273 IPR036749 -
Lele27g0829 278 SUPERFAMILY Barwin-like endoglucanases 51 202 IPR036908 -
Lele27g0829 278 Pfam Lytic transglycolase 87 174 IPR009009 -
Lele27g0829 278 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 194 273 IPR007117 -
Lele27g0829 278 SMART dpbb_1 87 174 IPR007112 -
Lele27g0829 278 PANTHER EXPANSIN-A15 37 276 IPR002963 GO:0009664
Lele27g0829 278 FunFam Expansin 184 276 - -
Lele27g0829 278 Gene3D - 37 180 IPR036908 -
Lele27g0829 278 Gene3D - 184 276 IPR036749 -
Lele27g0829 278 PRINTS Expansin signature 123 133 IPR002963 GO:0009664
Lele27g0829 278 PRINTS Expansin signature 82 96 IPR002963 GO:0009664
Lele27g0829 278 PRINTS Expansin signature 195 216 IPR002963 GO:0009664
Lele27g0829 278 PRINTS Expansin signature 159 172 IPR002963 GO:0009664
Lele27g0829 278 PRINTS Expansin signature 183 195 IPR002963 GO:0009664
Lele27g0829 278 PRINTS Expansin signature 230 251 IPR002963 GO:0009664
Lele27g0829 278 PRINTS Expansin signature 109 120 IPR002963 GO:0009664
Lele27g0829 278 PRINTS Expansin signature 259 275 IPR002963 GO:0009664
Lele27g0829 278 PRINTS Expansin signature 142 159 IPR002963 GO:0009664
Lele27g0829 278 Pfam Expansin C-terminal domain 185 262 IPR007117 -
Lele27g0829 278 FunFam Expansin 41 180 - -
Lele27g0829 278 PRINTS Expansin/Lol pI family signature 167 183 IPR007118 GO:0005576
Lele27g0829 278 PRINTS Expansin/Lol pI family signature 259 273 IPR007118 GO:0005576
Lele27g0829 278 PRINTS Expansin/Lol pI family signature 69 87 IPR007118 GO:0005576
Lele27g0829 278 PRINTS Expansin/Lol pI family signature 221 235 IPR007118 GO:0005576
Lele27g0829 278 PRINTS Expansin/Lol pI family signature 91 109 IPR007118 GO:0005576
Lele27g0829 278 PRINTS Expansin/Lol pI family signature 51 66 IPR007118 GO:0005576
Lele27g0829 278 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 70 184 IPR007112 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0829 Lele-ChrLele27 16321036 16323991 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0829 36 278 Expansin Gene Family AT2G39700 86.008 2.60e-163 451