Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0827 ATGGCAATCGGATTAATGGAGGTGCTTGTGGTCAAAGCTAAGGGCCTTCCTCTCTCTGATCTCTTTGCTCGTATCGATCCCTACGTTCTGATTCAGTACAAAGGCCAAGAGCGCCAGACTAGTGTGGTTCATGAGGGAGGTAGCAATCCAGTGTGGAACGAGAAATTTGTATTCAGAGCAGAATATCCAGGATCAGGAGACCAATTCAAGCTCATCTTTAAAATCAAGGACAAGGACTTCTTCTCTTCAGATGACTTCCTTGGCCAAGCCGAAATATATGTGGAGGATTTGTTGGCTGTAGGAGCAGAGAATGGAAAAGCTGAGCTTCATCCTCAAAAGTATAGAGTGGTTGGTGCAGATCAATCTTACTGTGGAGAGATTGAAGTTGGTATATCTTTCACCCTTAAGGAAGCAGACAAATCTCTTGACGAAAACATTGGAGGATGGAAGCAAAGCGACTACTAG 465 0.443 MAIGLMEVLVVKAKGLPLSDLFARIDPYVLIQYKGQERQTSVVHEGGSNPVWNEKFVFRAEYPGSGDQFKLIFKIKDKDFFSSDDFLGQAEIYVEDLLAVGAENGKAELHPQKYRVVGADQSYCGEIEVGISFTLKEADKSLDENIGGWKQSDY 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0827 154 ProSiteProfiles C2 domain profile. 1 110 IPR000008 -
Lele27g0827 154 Gene3D C2 domain 2 134 IPR035892 -
Lele27g0827 154 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 134 IPR035892 -
Lele27g0827 154 SMART C2_3c 5 106 IPR000008 -
Lele27g0827 154 Pfam C2 domain 6 101 IPR000008 -
Lele27g0827 154 PANTHER C2 DOMAIN-CONTAINING 3 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0827 Lele-ChrLele27 16302471 16304340 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0827 3 109 C2H2 Transcription Factor Family AT4G21160 33.645 1.98e-12 61.6