Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0825 ATGCGGAGGCACAGTCCAGGATACTACAGTCCTCCTAGGAGAGGATATGGTGGTGGCGGGAGAAGCCCTCCTAGGAGGGGATATGGTGGAGGCAGACGCAGGGAACAAAATCATGGGAGCCTTTTGGTTCGGAACATTCCTCTCGATTGCCGACCTGAGGAACTTCGAGTTCCATTTGAGCGGTTTGGACCTGTCCGGGATGTCTACCTACCGAAGGACTATTACACTGGAGAACCTCGCGGATTTGCATTTGTGCAATTTGTGGATCCTTATGATGCTTCAGAGGCACAGTATCATATGAATGGACAGATTTTTGCTGGAAGGGAAATCTCTGTAGTTCTTGCTGCTGAGTCAAGGAAAAGACCAGAGGAGATGCGTCATAAGTCAAGGATAAGGTATCTCTTCTATTTTCTATTTGATGCCTTGCTCTCATGA 435 0.4828 MRRHSPGYYSPPRRGYGGGGRSPPRRGYGGGRRREQNHGSLLVRNIPLDCRPEELRVPFERFGPVRDVYLPKDYYTGEPRGFAFVQFVDPYDASEAQYHMNGQIFAGREISVVLAAESRKRPEEMRHKSRIRYLFYFLFDALLS 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0825 144 FunFam Serine/arginine-rich SC35-like splicing factor SCL30 18 134 - -
Lele27g0825 144 MobiDBLite consensus disorder prediction 1 39 - -
Lele27g0825 144 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 39 117 IPR000504 GO:0003723
Lele27g0825 144 Gene3D - 32 133 IPR012677 -
Lele27g0825 144 SUPERFAMILY RNA-binding domain, RBD 36 131 IPR035979 GO:0003676
Lele27g0825 144 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 41 110 IPR000504 GO:0003723
Lele27g0825 144 PANTHER TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED 34 129 - -
Lele27g0825 144 SMART rrm1_1 40 113 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0825 Lele-ChrLele27 16295300 16297331 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0825 9 102 Eukaryotic Initiation Factors Gene Family AT3G11400 37.234 8.80e-10 53.9