Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0824 ATGCTTGGCGGCCGTGAGGCGGACGGCGGAACTCCGGTCGGTCAACGCTGGGTCAAGAGTGACCCTGTGAATTTAACTCATGATAGCAAAGAAGAGGATGGTTTGTTTGGTGGAAGCCAAAAGGTCTCCCAATTGAAAATTTTCACATATAACGAGCTTAAAGCAGCTACAAGGAACTTTCGTTCAAACAATAGAGTGGGTGAAGGTGGGTTTGGTAGTGTATTTAAGGGGTGGTTTCATGAGCAGACACTTGCACCTTCTAAACCCTGCACTGGGATTGCCTTTGCTGTGAAGAAGCATGACCTAGATGGCTTCCAAGGGCACAAGGAATGGTTGGCAGAGATCAATTTTCTGGCACAGCTGCATCATCCTAACATTGTGAAATTGATTGGCTACTGCTCAGAAGATGACCATCGGTTTTTGGTATACGAGTTTTTGACCAAAGGCAGCTTGGATATTCATTTATTTCGAAGGATGTATCATGTTGAACCACTTTCTTGGAGCAACCGTATGAAAATTGCCCTTGATGTTGCCAAAGTTCTTGCATTTCTTCATAGTGATGAAGTAAATGTGATATATCGAGATTTAAAAGCTTCTAATATCTTGCTAGATGCAAACTTCAATGCAAAGCTATGTAATTTTGGTTTGGCAAAGGACGGACCATCAGGTGATGAGAGCCATGTCTCTACAACGGTCATGGGCACATATGGCTATGCTGCTCCTGAGTATATAGCCACAGGTCACTTGTCCAAGAAGAGTGATGTCTACATGTTTGGGGTTGTTCTGCTTGAAATTGTGTCAGGCAAACGTGCATTGGACGTACAAAGGCCAGCCTGGGAACGTAATTTAGTTGAATGGGCCAAGCCGTACCTTCAGAGCAAGCGTCGGATTTTCAAAGTTATGGATGTTCATATCGAAGGCCAGTACCTGGTACGTGAAGCCATGAAGGTGGCTAAAATCGCGATTCAATGCCTATCTGCAGAACCCCGGTTGAGACCAACCATGGCCGATGTGGTAAGAGCATTGGAACAGCTTCAGGATTCCAGAGATACAGGTAGCTCAAAGCGGTAG 1071 0.451 MLGGREADGGTPVGQRWVKSDPVNLTHDSKEEDGLFGGSQKVSQLKIFTYNELKAATRNFRSNNRVGEGGFGSVFKGWFHEQTLAPSKPCTGIAFAVKKHDLDGFQGHKEWLAEINFLAQLHHPNIVKLIGYCSEDDHRFLVYEFLTKGSLDIHLFRRMYHVEPLSWSNRMKIALDVAKVLAFLHSDEVNVIYRDLKASNILLDANFNAKLCNFGLAKDGPSGDESHVSTTVMGTYGYAAPEYIATGHLSKKSDVYMFGVVLLEIVSGKRALDVQRPAWERNLVEWAKPYLQSKRRIFKVMDVHIEGQYLVREAMKVAKIAIQCLSAEPRLRPTMADVVRALEQLQDSRDTGSSKR 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0824 356 ProSiteProfiles Protein kinase domain profile. 60 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g0824 356 MobiDBLite consensus disorder prediction 1 20 - -
Lele27g0824 356 Gene3D Transferase(Phosphotransferase) domain 1 146 355 - -
Lele27g0824 356 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 146 355 - -
Lele27g0824 356 ProSitePatterns Serine/Threonine protein kinases active-site signature. 191 203 IPR008271 GO:0004672|GO:0006468
Lele27g0824 356 Gene3D Phosphorylase Kinase; domain 1 44 145 - -
Lele27g0824 356 SUPERFAMILY Protein kinase-like (PK-like) 41 342 IPR011009 -
Lele27g0824 356 FunFam Serine/threonine-protein kinase BIK1 27 145 - -
Lele27g0824 356 Pfam Protein tyrosine and serine/threonine kinase 63 342 IPR001245 GO:0004672|GO:0006468
Lele27g0824 356 SMART serkin_6 60 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele27g0824 356 ProSitePatterns Protein kinases ATP-binding region signature. 66 99 IPR017441 GO:0005524
Lele27g0824 356 PANTHER OS01G0588500 PROTEIN-RELATED 43 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0824 Lele-ChrLele27 16290474 16293167 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0824 46 342 Glycoside Hydrolase AT3G07070 49.164 1.18e-97 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele27g0824 PK_Tyr_Ser-Thr 1.1e-44 CL0016