Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0816 ATGGACATTTCTTCTCCCTCTTCCTCTCACTCCTCCTCCGGCGATCTCAGTTCTGACGCCAATCTCGATGCCGACACTCCTCGAAACCCCCTTGCCGTCCGGCGAGCCCTCCAGCTCCTCCAATCTGGCGACCCCGATTTCAAGCTCCAAGCCGCTCGCGATATTCGCCGCCTCACCAAAACCTCCCAGCGTTGTCGCCGCCAGCTCTCTCAAGCTGTCGGTCCCCTCGTTTCCATGCTCCTACTCGACTCCTCCGAGTCACACGAGCCTGCTCTTCTCGCTTTGCTCAACCTTGCCGGAACACCCAAGTCTCAGTTAAAAGCCCGCAACCTTCTGCAACTACTGAGAGAAACTCCATATCCCAGATCAGAAATTCAACCAGACACTCTTGAGAACATAGTTTGCAATATCATATCCCAGATTGATGGGGATGACCAGCCTGGTAAAGCAAAGAAGATGCTGGCTGAGATGGTCCAAGTCAGCATGGAACAGAGTCTGAGACATTTACAGCAAAGGGCTCTTGTGTTCACTCCCACAAGTGATAGGCCTACTATTACTAACTGTGCTTCTGAAGTATCTTCAAAATGA 588 0.5204 MDISSPSSSHSSSGDLSSDANLDADTPRNPLAVRRALQLLQSGDPDFKLQAARDIRRLTKTSQRCRRQLSQAVGPLVSMLLLDSSESHEPALLALLNLAGTPKSQLKARNLLQLLRETPYPRSEIQPDTLENIVCNIISQIDGDDQPGKAKKMLAEMVQVSMEQSLRHLQQRALVFTPTSDRPTITNCASEVSSK 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0816 195 SUPERFAMILY ARM repeat 35 140 IPR016024 -
Lele27g0816 195 MobiDBLite consensus disorder prediction 1 24 - -
Lele27g0816 195 Gene3D - 11 180 IPR011989 -
Lele27g0816 195 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 24 99 - -
Lele27g0816 195 MobiDBLite consensus disorder prediction 1 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0816 Lele-ChrLele27 16213426 16216468 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g1281 26 8462443 8463664 Lele27g0816 27 16213426 16216468 CCT
Lele27g0815 27 16196886 16198146 Lele27g0816 27 16213426 16216468 CCT
Lele28g1273 28 8502357 8503565 Lele27g0816 27 16213426 16216468 CCT
Lele25g1267 25 8538303 8541322 Lele27g0816 27 16213426 16216468 CCT
Lele27g0816 27 16213426 16216468 Lele27g0816 27 16213426 16216468 ECH
Lele25g1267 25 8538303 8541322 Lele27g0816 27 16213426 16216468 hybridization
Lele26g1280 26 8443352 8446329 Lele27g0816 27 16213426 16216468 hybridization