Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0808 ATGGAGAAGATCAACTCAGAGTTGAGGAAAGGTGCCTGGACCCAAGAGGAAGACAATCTTCTCAGAGCTTGCATTCACCAGTACGGCGAAGGAAAATGGCATCTTGTTCCTCAAAGAGCTGGTTTGAAGAGATGCAGGAAAAGCTGTAGAATAAGATGGTCATTGATAGCTGGAAGGCTACCAGGAAGAACAGCGAATGACGTGAAAAACTTCTGGCACACCAAAATGCGCAATAAGACAGAAGAAAATCAGAAGAAGAAGAAAGCAAAAGAGGTGATGAGCATAATCTCAGAGGAGACAGCCAAAGTAACAAGGCACGTAATAATAAAACCTCGGCCTCATACTTTCTCTAAGAATTCGCCATGGCTAAGGAAGAATAATAAACTTGTTTCTGCATGTGAAAGTGTTGGTGCTGGTGGTGCTTCTACCAGTAGTACAGGTGGCAGTTTTGCACAGCTGTGTCCTCCTGCCGATTTAAGTAATAGCGAATCAGACGAGTGGTGGGAGAGTTTACTGAAGAAGGGAGGAGATGAGGGGCAAAAAGGGGAATCTATGATGGAGTTTTTTGACCAAGACTTTCTCAAAACGGAGGATCCCAACAGTTGGTGGAGTCACTATTTATGA 624 0.4407 MEKINSELRKGAWTQEEDNLLRACIHQYGEGKWHLVPQRAGLKRCRKSCRIRWSLIAGRLPGRTANDVKNFWHTKMRNKTEENQKKKKAKEVMSIISEETAKVTRHVIIKPRPHTFSKNSPWLRKNNKLVSACESVGAGGASTSSTGGSFAQLCPPADLSNSESDEWWESLLKKGGDEGQKGESMMEFFDQDFLKTEDPNSWWSHYL 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0808 207 Gene3D - 7 53 - -
Lele27g0808 207 SUPERFAMILY Homeodomain-like 10 77 IPR009057 -
Lele27g0808 207 Pfam Myb-like DNA-binding domain 10 53 IPR001005 -
Lele27g0808 207 SMART sant 9 78 IPR001005 -
Lele27g0808 207 FunFam Myb transcription factor 10 55 - -
Lele27g0808 207 CDD SANT 12 74 IPR001005 -
Lele27g0808 207 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 6 53 - -
Lele27g0808 207 Gene3D - 54 85 - -
Lele27g0808 207 ProSiteProfiles Myb-like domain profile. 5 57 IPR001005 -
Lele27g0808 207 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 5 61 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0808 Lele-ChrLele27 16143463 16144369 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0808 1 120 MYB Transcription Factor Family AT1G66390 48.026 8.40e-38 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele27g0808 Myb_DNA-binding 7.9e-13 CL0123