Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0807 ATGGAGAAGATCAACTCAGAGTTGAGGCAAGGTACCTGGACCCAAGAGGAAGACAATCTTCTCAGAACTTGCGTTCAAAAATATGGCGAGGGAAAGTGGAATCTGGTTCCCCAAAGAGCTGGTTTGAAGAGATGCAGGAAAAGCTGTAGAATAAGCTGGAAGGCTACCGGAAGAACAGCGAATGACGTGAAGAACTTCTGGTACACCAACAAGCGCAATAAGACAGAAGAAAATCAGAGGAAGAAAGCAAACGAGAATAAGGTTGTTACTGCAAGTGAAAGTGGTGGTGTTAGTGCTAGTGCTGGTGGTTGCTGCAGTTTTGCAGTGCCATGTCCTCCTGCTGATTTTAGTAAGAGCGAGTCAGAAGAATGTTGGGAGAGTTTACTGAAGAAGGAAGAAGGAGATGATGAGGGGCAAGAAGGGTATTGTATGATGGAGTTTTTTGACCAAGAAGGGTATGAAATTTTAAAAATTGTGATGATCTTTCCTCCTCTCATGTAA 501 0.4351 MEKINSELRQGTWTQEEDNLLRTCVQKYGEGKWNLVPQRAGLKRCRKSCRISWKATGRTANDVKNFWYTNKRNKTEENQRKKANENKVVTASESGGVSASAGGCCSFAVPCPPADFSKSESEECWESLLKKEEGDDEGQEGYCMMEFFDQEGYEILKIVMIFPPLM 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0807 166 CDD SANT 12 71 IPR001005 -
Lele27g0807 166 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 6 53 - -
Lele27g0807 166 Gene3D - 7 75 - -
Lele27g0807 166 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 5 75 IPR017930 -
Lele27g0807 166 SMART sant 9 73 IPR001005 -
Lele27g0807 166 ProSiteProfiles Myb-like domain profile. 5 57 IPR001005 -
Lele27g0807 166 SUPERFAMILY Homeodomain-like 8 67 IPR009057 -
Lele27g0807 166 FunFam Myb transcription factor 10 55 - -
Lele27g0807 166 Pfam Myb-like DNA-binding domain 11 53 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0807 Lele-ChrLele27 16130978 16131880 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0807 1 76 MYB Transcription Factor Family AT1G66390 42.478 4.80e-22 87.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele27g0807 Myb_DNA-binding 8.1e-12 CL0123