Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0806 ATGGAGAAGAACACAGGTACTGGGTTGAGGAAAGGTAGCTGGACCCAAAAGGAAGACAATCTTCTCATAGCTTGCATTCACCAGTACGGCGAAGGAAAATGGCATCTTGTTCCTCAAAGAGCTGGTTTGAAGAGATGCAGGAAAAGCTGCAGAATGAGATGGTTGAATTATCTGAAACCCAACATCAATCGAGGAAGCTTCACCGACGACGAGGTTGATATGATTCGCAGGTTCCATAAACTTCTCGGCAACAGATGGTCGTTGATAGCTGGAAGGCTACCAGGAAGAACGGCGAATGCCGTGAAGAACTTCTGGCACACCAACATGCGCAATAGGAAGAAAGAAGAAAGCCACCACGAGAGGAAAGCAGAAGAGGTGATGATTAATAATAGTGTAGAGGAGACGACGGCAGAAGTTGTAAAACAGCACGTAGTGATGCCTCACACTTTCTCTAAGAATTCGCCATGGCTGAGGAAGAATAATAAGCTTGTTTCTGCAAGTGACGGTGGTGATACTAATAATAATAACAATGCAGAAGCTAGAACTAGTTCCGGTGATATGATGAAAGAAGGTATTATTGCAGAGCCATGTGCTACTGATTTTTTGCAGAGAGATCATCATCAGTCAGATGAGTGGTGGGAGAGTTTGCTGAACAAGGAAGTAGATGAAGGGCAAATTGGGAAGTTCACAATGATGGAGTTTTGGGACTACGAAGACTTTCTGAAAATGGAAGGTCCATTTTTGGAAGGCCAGGGTTCTTGGAGTCACTGTTCGTATAAGTTCTAA 786 0.4402 MEKNTGTGLRKGSWTQKEDNLLIACIHQYGEGKWHLVPQRAGLKRCRKSCRMRWLNYLKPNINRGSFTDDEVDMIRRFHKLLGNRWSLIAGRLPGRTANAVKNFWHTNMRNRKKEESHHERKAEEVMINNSVEETTAEVVKQHVVMPHTFSKNSPWLRKNNKLVSASDGGDTNNNNNAEARTSSGDMMKEGIIAEPCATDFLQRDHHQSDEWWESLLNKEVDEGQIGKFTMMEFWDYEDFLKMEGPFLEGQGSWSHCSYKF 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0806 261 FunFam Myb transcription factor 11 63 - -
Lele27g0806 261 Pfam Myb-like DNA-binding domain 11 58 IPR001005 -
Lele27g0806 261 Pfam Myb-like DNA-binding domain 64 107 IPR001005 -
Lele27g0806 261 SUPERFAMILY Homeodomain-like 8 105 IPR009057 -
Lele27g0806 261 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 7 215 - -
Lele27g0806 261 MobiDBLite consensus disorder prediction 163 183 - -
Lele27g0806 261 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 6 62 IPR017930 -
Lele27g0806 261 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 113 IPR017930 -
Lele27g0806 261 CDD SANT 13 58 IPR001005 -
Lele27g0806 261 Gene3D - 65 137 - -
Lele27g0806 261 ProSiteProfiles Myb-like domain profile. 6 58 IPR001005 -
Lele27g0806 261 ProSiteProfiles Myb-like domain profile. 59 109 IPR001005 -
Lele27g0806 261 CDD SANT 66 109 IPR001005 -
Lele27g0806 261 SMART sant 10 60 IPR001005 -
Lele27g0806 261 SMART sant 63 111 IPR001005 -
Lele27g0806 261 Gene3D - 8 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0806 Lele-ChrLele27 16125625 16126601 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0806 8 221 MYB Transcription Factor Family AT1G66370 47.748 2.17e-55 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele27g0806 Myb_DNA-binding 5e-15 CL0123